Gene PSPTO_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0947 
Symbol 
ID1182576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1024154 
End bp1024888 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID637392324 
Producthypothetical protein 
Protein accessionNP_790786 
Protein GI28868167 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTCA AGCTGTACGG CGCAGAAACC CAGTTTGTCG AACTGGAGCT TGATCCCGGC 
GAAAGTGCCG TCGCCGAAGC CGGGGCGATG ATGTACAAGA CCTGCGACGT GCAGATGGAG
ACTATTTTCG GCGACGGCAG CAATCAGTCG TCCGGGCTGC TGGGTTCGCT GTTCGGTGCC
GGCAAGCGCA TGCTCACCGG CGAAAGCCTG TTCACCACGG TGTTCTCGCA ACAAGGCTCG
GGCAAGGGCC GAGTCGCTTT CGCTGCACCC TACCCCGGCA CCATTTTGCC CCTGAACCTG
CGCGATTTCG GCGGCAAGCT GATCTGCCAG AAAGACAGCT TTCTGGCCGG CGCCAAGGGC
GTCTCCATCG GCATCCAGTT TCAGAAGAAA ATCCTCACCG GACTGTTCGG CGGCGAAGGT
TTTGTCCTGC AAAAGCTCGA AGGTGATGGC TGGGTATTCG TGCACATGGG CGGCACGGTG
CGCAAGATCG AACTGGCCGC GGGCGAAGCG CTGGATGTGG ATACCGGCTG CCTGGCAGCC
ATGACCCAGA CGGTCGATTA CGATATCCGC ATGGTCGGTG GTGGCATCAA ATCCATGCTG
TTCGGCGGTG AAGGCGTGTT TTTCGCCAGG CTGACCGGGC CTGGCACGGT ATGGCTGCAA
AGCCTGCCCT TTTCGCGCCT GGCCGGGCGC ATGCTGGCGG CCGGGCCAGC CGGTGTGGGC
AGAAGCGAAC GTTAA
 
Protein sequence
MDFKLYGAET QFVELELDPG ESAVAEAGAM MYKTCDVQME TIFGDGSNQS SGLLGSLFGA 
GKRMLTGESL FTTVFSQQGS GKGRVAFAAP YPGTILPLNL RDFGGKLICQ KDSFLAGAKG
VSIGIQFQKK ILTGLFGGEG FVLQKLEGDG WVFVHMGGTV RKIELAAGEA LDVDTGCLAA
MTQTVDYDIR MVGGGIKSML FGGEGVFFAR LTGPGTVWLQ SLPFSRLAGR MLAAGPAGVG
RSER