Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0947 |
Symbol | |
ID | 1182576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1024154 |
End bp | 1024888 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392324 |
Product | hypothetical protein |
Protein accession | NP_790786 |
Protein GI | 28868167 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACTTCA AGCTGTACGG CGCAGAAACC CAGTTTGTCG AACTGGAGCT TGATCCCGGC GAAAGTGCCG TCGCCGAAGC CGGGGCGATG ATGTACAAGA CCTGCGACGT GCAGATGGAG ACTATTTTCG GCGACGGCAG CAATCAGTCG TCCGGGCTGC TGGGTTCGCT GTTCGGTGCC GGCAAGCGCA TGCTCACCGG CGAAAGCCTG TTCACCACGG TGTTCTCGCA ACAAGGCTCG GGCAAGGGCC GAGTCGCTTT CGCTGCACCC TACCCCGGCA CCATTTTGCC CCTGAACCTG CGCGATTTCG GCGGCAAGCT GATCTGCCAG AAAGACAGCT TTCTGGCCGG CGCCAAGGGC GTCTCCATCG GCATCCAGTT TCAGAAGAAA ATCCTCACCG GACTGTTCGG CGGCGAAGGT TTTGTCCTGC AAAAGCTCGA AGGTGATGGC TGGGTATTCG TGCACATGGG CGGCACGGTG CGCAAGATCG AACTGGCCGC GGGCGAAGCG CTGGATGTGG ATACCGGCTG CCTGGCAGCC ATGACCCAGA CGGTCGATTA CGATATCCGC ATGGTCGGTG GTGGCATCAA ATCCATGCTG TTCGGCGGTG AAGGCGTGTT TTTCGCCAGG CTGACCGGGC CTGGCACGGT ATGGCTGCAA AGCCTGCCCT TTTCGCGCCT GGCCGGGCGC ATGCTGGCGG CCGGGCCAGC CGGTGTGGGC AGAAGCGAAC GTTAA
|
Protein sequence | MDFKLYGAET QFVELELDPG ESAVAEAGAM MYKTCDVQME TIFGDGSNQS SGLLGSLFGA GKRMLTGESL FTTVFSQQGS GKGRVAFAAP YPGTILPLNL RDFGGKLICQ KDSFLAGAKG VSIGIQFQKK ILTGLFGGEG FVLQKLEGDG WVFVHMGGTV RKIELAAGEA LDVDTGCLAA MTQTVDYDIR MVGGGIKSML FGGEGVFFAR LTGPGTVWLQ SLPFSRLAGR MLAAGPAGVG RSER
|
| |