Gene PSPTO_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0856 
Symbol 
ID1182485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp927082 
End bp927900 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content52% 
IMG OID637392234 
Producthypothetical protein 
Protein accessionNP_790696 
Protein GI28868077 
COG category[S] Function unknown 
COG ID[COG2357] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.877348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACG CCGAGCCGCT GATTCAGCAT TGCTTGCAAC GATTCACTGA GGTGAATCAT 
GAGCTGTCCA TTTTTATGAC GACAGTTCGC ACGTGGTTTG AGACACACCC GCGACTGGTC
GGACATCCAC ACCCTGTTAT CCACTCAGTT AAAAGTCGCA TTAAGGATCC GGGACATTTA
ACAGAAAAAG TAGCCCGAAA ACTTGCCGAT TTAGCAGCTG AACCCGCGCC GGAAGAAATG
TTCCGTCGGC TAACAGACCT GTCTGGAGTG AGAGTTTTGT TGCTACACCA GTATCAATTT
ATTGCACTTC ACGCGGAGTT CCTGAAGAAG ACCAAGAACG ACTGGCACCT CGTGGAACCC
CCAAAGGCCT ACACGTGGGA TCCAGAATCA GCAGAGTTTT TCAAAAAGCT GGACATCAAC
ACCGAGTTGA AGGAGAGCCA TTATACTAGC TTGCACTATG TGATACGTCC AAAAGCCGAG
TCAGACGTGG TGTGTGAGAT CCAAGTGCGC ACTCTTTTCG AGGAAATCTG GGGAGAGGTA
GATCACTCCT TAAACTACCC ATCGCCAACG GACAACGTTG CCTGTAGCGA GCAGCTACGA
GTATTGGCTA AAGTCGTTGG GGCAGGCAGC CGTTTGGTGG ACTCTATATT CCGCACCGCC
CAACCCATCG TTTCTTCCAC GGTGGAGCCT GTCTTGGAAC CATCTGTGGA GCACTTGGCA
AAGGTTGCCC TATCATCGGT GACACCTCCC GCAGCGACGC CTACGCTAGT GCAGAGTGAG
GAGGGGCTGC CGATCAACCC CGAGGATGAC CCCACTTGA
 
Protein sequence
MTNAEPLIQH CLQRFTEVNH ELSIFMTTVR TWFETHPRLV GHPHPVIHSV KSRIKDPGHL 
TEKVARKLAD LAAEPAPEEM FRRLTDLSGV RVLLLHQYQF IALHAEFLKK TKNDWHLVEP
PKAYTWDPES AEFFKKLDIN TELKESHYTS LHYVIRPKAE SDVVCEIQVR TLFEEIWGEV
DHSLNYPSPT DNVACSEQLR VLAKVVGAGS RLVDSIFRTA QPIVSSTVEP VLEPSVEHLA
KVALSSVTPP AATPTLVQSE EGLPINPEDD PT