Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0856 |
Symbol | |
ID | 1182485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 927082 |
End bp | 927900 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637392234 |
Product | hypothetical protein |
Protein accession | NP_790696 |
Protein GI | 28868077 |
COG category | [S] Function unknown |
COG ID | [COG2357] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.877348 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACG CCGAGCCGCT GATTCAGCAT TGCTTGCAAC GATTCACTGA GGTGAATCAT GAGCTGTCCA TTTTTATGAC GACAGTTCGC ACGTGGTTTG AGACACACCC GCGACTGGTC GGACATCCAC ACCCTGTTAT CCACTCAGTT AAAAGTCGCA TTAAGGATCC GGGACATTTA ACAGAAAAAG TAGCCCGAAA ACTTGCCGAT TTAGCAGCTG AACCCGCGCC GGAAGAAATG TTCCGTCGGC TAACAGACCT GTCTGGAGTG AGAGTTTTGT TGCTACACCA GTATCAATTT ATTGCACTTC ACGCGGAGTT CCTGAAGAAG ACCAAGAACG ACTGGCACCT CGTGGAACCC CCAAAGGCCT ACACGTGGGA TCCAGAATCA GCAGAGTTTT TCAAAAAGCT GGACATCAAC ACCGAGTTGA AGGAGAGCCA TTATACTAGC TTGCACTATG TGATACGTCC AAAAGCCGAG TCAGACGTGG TGTGTGAGAT CCAAGTGCGC ACTCTTTTCG AGGAAATCTG GGGAGAGGTA GATCACTCCT TAAACTACCC ATCGCCAACG GACAACGTTG CCTGTAGCGA GCAGCTACGA GTATTGGCTA AAGTCGTTGG GGCAGGCAGC CGTTTGGTGG ACTCTATATT CCGCACCGCC CAACCCATCG TTTCTTCCAC GGTGGAGCCT GTCTTGGAAC CATCTGTGGA GCACTTGGCA AAGGTTGCCC TATCATCGGT GACACCTCCC GCAGCGACGC CTACGCTAGT GCAGAGTGAG GAGGGGCTGC CGATCAACCC CGAGGATGAC CCCACTTGA
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Protein sequence | MTNAEPLIQH CLQRFTEVNH ELSIFMTTVR TWFETHPRLV GHPHPVIHSV KSRIKDPGHL TEKVARKLAD LAAEPAPEEM FRRLTDLSGV RVLLLHQYQF IALHAEFLKK TKNDWHLVEP PKAYTWDPES AEFFKKLDIN TELKESHYTS LHYVIRPKAE SDVVCEIQVR TLFEEIWGEV DHSLNYPSPT DNVACSEQLR VLAKVVGAGS RLVDSIFRTA QPIVSSTVEP VLEPSVEHLA KVALSSVTPP AATPTLVQSE EGLPINPEDD PT
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