| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0838 |
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| Symbol | |
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| ID | 1182467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 908556 |
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| End bp | 909749 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637392220 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_790683 |
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| Protein GI | 28868064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATC TATTCAGCCA AAACAGTCGC GCACTTTATG CGTGCTACGC CGCCATGGCA
TGTCTGGCCA TGGCGCTTAA CTTCCTACCG GTATATCTGA CTTCATTCAG TGATACGTTC
GGTGGAGCAT CAGGGCTTAC AGCTGAGCAA CTTGGCAGAA TTCCCGCTGT CATGTTTCTC
AGTTTCATCG TTGCAATTCT GGTTACGGGG CCTTTGGCGG ACCGTGGCAG CGCCATGGCT
TTCATTCTCA TCGGTCTGCT GATCACCATG GCCGGTTTGG GAGTAGTCGC CTGCTCTCCT
TCCTACTCCT TTCTGTTGTT CGCCGTTGCG GTTATGGGTT TTGGCGCGGG TGTACTGGAC
ATGATCCTGA GCCCCATCGT GGCGGCCCTG CAGCCAGATC GGCGTAGCGC AGCCATAAAC
TGGTTGCATG CTTTTTTCTG CGTAGGTGCT GTGGGGGCAG TGCTGATCGC CAGTGTCGCG
CTGAGGTGGG GTATTTCGTG GCGCATTGTT TCACTCGTCA TGATGGCTGC GCCTTTATTT
ACTTTTTTGC TGTTTCTGCG GTTGACCTTG CCCCCCTTAA TAGATGAAGA CACGCAACGT
GACTCGATGC CGGCGCTTAT CCGGCAACCC TTTTTTATCG TTTGTCTGAT CGCCATCTTT
TTAGGTGGAG CAACCGAAAC AGGGCTTTCA CAATGGCTGC CTACCTACGT CGAACAAGGA
TTAGGGTACT CGAAAGAAGC TGGTGGCTTT ACGCTGGCTG GATTTTCCGT CGGTATGGCA
CTCGGCCGAA TGGTCGCTGC GGTCTTGCAA GAGCACATCC CACCAGTTCC TCTGATGCTG
GGGTGTTGCG CGGTTACTGC TGTTCTTTTC ATACTAATCA GTTTTCCGCC TAGCCCTGTA
ATTGCAATAG CTGCTGCTAT TGCCGCAGGA TTTTCGGGAA GTTGCCTTTG GCCAACGATG
CTAGCTGTTT CTGCTGATGC CTACCCCCAG GGAGGGGCGA CAATGTTCTC TGTATTGACA
GCGATCGGCA ACGCGGGGTG TAGTATTGTC CCTTGGTTGG TGGGTGTCAT CATAAATTAT
TCAGACATTC ACATTGGATT GTTGGCGGTC ATGGCTTGCC CGGTAGGGAT GATGGTGTTG
CTCGTATGGA TGGCTCGTTG GTCACGTGGA AAGGCTGTGA TTCCTCCTCC TTGA
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| Protein sequence | MKNLFSQNSR ALYACYAAMA CLAMALNFLP VYLTSFSDTF GGASGLTAEQ LGRIPAVMFL
SFIVAILVTG PLADRGSAMA FILIGLLITM AGLGVVACSP SYSFLLFAVA VMGFGAGVLD
MILSPIVAAL QPDRRSAAIN WLHAFFCVGA VGAVLIASVA LRWGISWRIV SLVMMAAPLF
TFLLFLRLTL PPLIDEDTQR DSMPALIRQP FFIVCLIAIF LGGATETGLS QWLPTYVEQG
LGYSKEAGGF TLAGFSVGMA LGRMVAAVLQ EHIPPVPLML GCCAVTAVLF ILISFPPSPV
IAIAAAIAAG FSGSCLWPTM LAVSADAYPQ GGATMFSVLT AIGNAGCSIV PWLVGVIINY
SDIHIGLLAV MACPVGMMVL LVWMARWSRG KAVIPPP
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