| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0827 |
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| Symbol | rluD |
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| ID | 1182452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 894060 |
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| End bp | 895022 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_001621404 |
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| Protein GI | 162533081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.587851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGAAA ATATAGAACT CCGCGCAGAG GTGCCGTCCG AATTGGGCGG TCAACGCCTC
GATCAAGTCG CCGCACAATT ATTCGCTGAG CACTCGCGCT CGCGCCTTTC CGCCTGGATC
AAGGACGGCC GCCTGACTGT GGACGGAGGC GTGCTGCGCC CTCGTGACAT CGTGCATGGT
GGCGCTGTTC TCGAGCTGAT TGCCGAGCAG GAGGCCCAGG GTGAATGGGT CGCTCAGGAC
ATCGAGCTCG ACATCATCTA TGAAGACGAT CAGATCCTCG TCATCAACAA GCCGGCAGGT
CTGGTGGTGC ATCCGGCTGC TGGTCACGCC GACGGCACGC TGCTCAATGC CTTGCTGCAC
CACGTGCCGG ACATCGTCAA TGTCCCGCGT GCCGGTATCG TGCACCGTCT GGACAAGGAC
ACCACCGGTC TGATGGTGGT CGCCAAGACC ATTCAGGCGC AGACCCAACT GGTGACCCAG
TTGCAGAGTC GCAGTGTCAG CCGTATCTAC GAGTGCATCG TGATCGGCGT GGTGACCGCA
GGCGGCAAGA TCGACGCGCC GATCGGCCGT CACGGCCAGC AGCGCCAGCG TATGGCGGTG
ATGGAAGGCG GCAAGCAGGC GGTCAGCCAT TACCGCGTGC TGGAGCGTTT CCGTTCGCAC
ACCCACGTTC GGGTCAAGCT CGAAACCGGC CGCACGCACC AGATTCGTGT GCACATGGCG
CACGTCAACT ACCCGTTGGT CGGAGACCCG GCCTACGGCG GTCGTTTCCG CATTCCGCCA
GCGGCCAGCC TGACCATGGT CGATTCGCTC AAGACCTTCC CGCGTCAGGC GCTGCATGCG
CGTTTCCTGG AGCTTGATCA TCCGATCACC GGTAAGCGCA TGAGCTGGGA ATCGCCACTG
CCCGACGATT TCGTCTGGTT GCTGTCGTTG CTCAAGCAGG ATCGCGAGGC GTTCATCGGG
TGA
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| Protein sequence | MSENIELRAE VPSELGGQRL DQVAAQLFAE HSRSRLSAWI KDGRLTVDGG VLRPRDIVHG
GAVLELIAEQ EAQGEWVAQD IELDIIYEDD QILVINKPAG LVVHPAAGHA DGTLLNALLH
HVPDIVNVPR AGIVHRLDKD TTGLMVVAKT IQAQTQLVTQ LQSRSVSRIY ECIVIGVVTA
GGKIDAPIGR HGQQRQRMAV MEGGKQAVSH YRVLERFRSH THVRVKLETG RTHQIRVHMA
HVNYPLVGDP AYGGRFRIPP AASLTMVDSL KTFPRQALHA RFLELDHPIT GKRMSWESPL
PDDFVWLLSL LKQDREAFIG
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