Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0826 |
Symbol | |
ID | 1182451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 892888 |
End bp | 893904 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637392206 |
Product | competence lipoprotein ComL, putative |
Protein accession | NP_790673 |
Protein GI | 28868054 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACACC TGCTGCTGAT CGCCATCCTC GCATTGACTG CGGCCTGTTC GTCGAAGGAA GTCATCGACG AAAACCTCAG CGAAGTCGAG CTGTACCAGC AGGCGCAGGC CGACCTGGGA AATAACAGCT ATAACAGCGC CACGGAGAAG CTCAAGGCGC TGGAATCACG CTATCCGTTC GGTCGCTATG CCGATCAGGC CCAGCTCGAG TTGATCTACT CGAACTACAA GAATGGTGAA CCCGAAGCAG CCAAATCCGC TGCCGAGCGT TTCATTCGCC TGCATCCGCA GCACCCGAAC GTCGATTACG CCTACTACAT GAAGGGCCTG ACTTCCTTCG ACCAGGACGT TGGCCTGCTG GCCCGCTTCC TGCCGCTGGA CCAGACCAAG CGTGACCCCG GTGCTGCCCG CGACTCGTTC AACGAGTTCG CCCAGCTGAC CAGCCGCTAC CCCAACAGCC GTTATTCGCC TGATGCCAAG CAGCGCATGA TTTACCTGCG CAACCTGCTG GCCTCCTACG AAATCCACGT GGCCGACTAT TACCTGACCC GTCAGGCCTA TGTCGCCGCC GCCAACCGTG GCCGTTACGT GGTGGAAAAC TTCCAGGAGA CGCCATCGGT CGGCGACGGC CTGGCTGTCA TGGTCGAGTC CTATCAGCGT CTGCACCTTG ACGACCTCGC GGCCACCAGC CTCGAAGTGC TGAAGACCAA CTACCCGAAT CACCCTCAAC TGGTGGACGG CAAGTTCAAC CCGCGTCAGG CCGAAGCCGA TAACCGCTCA TGGCTGTCGA AAGCGACCCT TGGCCTGATC GACGGCAGCG CGCCGCTGCC ACCAGGCCAG ACCCGTGCCG ATCAGGACAT CAAGAAGCAG TATCAGGACG CCAAGGACTC CATCCCGAAA GAGCTGTTGC CGGAAAATCA GGCAGAGCTG GACGAGCAGG CGGAAAAAGA CGCCGAAGCG AAAGGCACCA AAAGCCGCTC GTGGTTCAGC TACATGACCC TGGGTCTGTT CGACTGA
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Protein sequence | MKHLLLIAIL ALTAACSSKE VIDENLSEVE LYQQAQADLG NNSYNSATEK LKALESRYPF GRYADQAQLE LIYSNYKNGE PEAAKSAAER FIRLHPQHPN VDYAYYMKGL TSFDQDVGLL ARFLPLDQTK RDPGAARDSF NEFAQLTSRY PNSRYSPDAK QRMIYLRNLL ASYEIHVADY YLTRQAYVAA ANRGRYVVEN FQETPSVGDG LAVMVESYQR LHLDDLAATS LEVLKTNYPN HPQLVDGKFN PRQAEADNRS WLSKATLGLI DGSAPLPPGQ TRADQDIKKQ YQDAKDSIPK ELLPENQAEL DEQAEKDAEA KGTKSRSWFS YMTLGLFD
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