| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0805 |
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| Symbol | ribF |
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| ID | 1182430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 869460 |
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| End bp | 870386 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392185 |
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| Product | riboflavin biosynthesis protein RibF |
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| Protein accession | NP_790652 |
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| Protein GI | 28868033 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0196] FAD synthase |
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| TIGRFAM ID | [TIGR00083] riboflavin kinase/FMN adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.231627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTGG TTAGAGGCCT TCACAACCTG CGCCCCGAGC ATCGGGGCTG CGTCGCCACG
ATTGGCAATT TCGACGGTGT TCACCGCGGC CACCAGGCGA TCCTGGCGCG TTTGCGTGAG
CGTGCCGTCG AATTGGGTGT GCCCAGCTGC GCGGTGATCT TCGAGCCGCA GCCGCGTGAG
TTCTTCGCGC CGCAAACGGC TCCGGCACGT CTGGCGCGTT TGCGCGACAA GCTTGAACTG
CTGGGTGCCG AGGGCGTGGA CCGGGTATTG TGTCTGTCCT TCAACCAGCG CCTGAGCAAA
CTCAGTGCGG CAAGCTTCGT CGAGACCGTG CTGATCGACG GTCTGGGCGT GCAGCACCTT
GAAGTAGGCG ACGATTTTCG TTTTGGCTAC GACCGGGTCG GTGATTTTGA TTTTCTGCAG
CAGGCCGGCA CGACGTATGG TTTTACCGTA GAAGCGGCGC AGACCGTTGA AATCGATGGC
CTGCGCGTCA GCAGCACCAA GGTGCGTAAA GCCCTGGCTG CGGCGGACTT TGCCCTTGCC
GAGCGCATGC TCGGTCGCCC GTTCCAGATA ACCGGACGGG TATTGCATGG CCAGAAGCTG
GCGCGTCAGT TGGGTACGCC CACCGCCAAC GTGCAACTCA AGCGTCGTCG TGTACCGTTG
AGCGGGGTTT ATCTGGTCAG CATGGACATC GACGGCAAGC CTTGGCCAGG CGTCGCCAAC
ATCGGTGTGC GTCCGACGGT GGCGGGTGAT GGCAGCGCGC ACCTCGAAGT GCATCTTCTG
GATTTTGCCG GCGATCTTTA CGGTCGGCGT TTAACGGTGG CTTTCCACCA CAAGCTGCGT
GATGAGCAGC GTTTCGCCTC ACTGGAGGCG CTCAAGACGG CGATCAATGC GGACGTCGCC
GCCGCCCGTG CCCATTGGCA TGGCTAA
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| Protein sequence | MQLVRGLHNL RPEHRGCVAT IGNFDGVHRG HQAILARLRE RAVELGVPSC AVIFEPQPRE
FFAPQTAPAR LARLRDKLEL LGAEGVDRVL CLSFNQRLSK LSAASFVETV LIDGLGVQHL
EVGDDFRFGY DRVGDFDFLQ QAGTTYGFTV EAAQTVEIDG LRVSSTKVRK ALAAADFALA
ERMLGRPFQI TGRVLHGQKL ARQLGTPTAN VQLKRRRVPL SGVYLVSMDI DGKPWPGVAN
IGVRPTVAGD GSAHLEVHLL DFAGDLYGRR LTVAFHHKLR DEQRFASLEA LKTAINADVA
AARAHWHG
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