| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0804 |
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| Symbol | |
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| ID | 1182429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 867789 |
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| End bp | 869327 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392184 |
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| Product | membrane protein, MviN family |
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| Protein accession | NP_790651 |
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| Protein GI | 28868032 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0938016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTAC TCAAATCACT CGCCGCCGTA AGCTCTATCA CCATGGTTTC CCGGGTTTTG
GGCTTCGTGC GCGACACCAT CATTGCCCGC ACTTTCGGCG CCGGAATGGC CACGGATGCG
TTCTTCATCG CCTTCAAACT GCCCAATCTG CTGCGTCGCA TCTTCGCGGA AGGGGCTTTT
TCGCAAGCCT TCGTGCCGAT TCTGGCCGAA TACAAGAGCC AGCAGGGCGA GGAGGCGACC
CGCACGTTTG TCGCCTATGT CACCGGGCTG CTGACCCTGG CGCTGGCAGT GGTGACGCTG
CTGGGGGTGA TCTTTGCGCC CTGGGTGATC TGGGCCACGG CGCCAGGCTT TGCCGACACG
CCGGAAAAAT TCGCCCTGAC CTCGGACCTG CTGCGGGTGA CCTTTCCTTA TATATTGCTG
ATTTCCCTGT CCTCGATGGC CGGCGCGATC CTCAATACCT GGAATCGTTT CTCGGTGCCT
GCGTTCGTGC CAACCCTGCT CAACGTCAGC ATGATTTTCT TCGCGCTGTT CCTCACCCCG
TACTTTGCCC CGCCGGTCAT GGCGCTGGGC TGGGCGGTGC TGGTCGGTGG CTTGCTGCAA
TTGCTTTATC AACTGCCGCA CCTGAAAAAA ATCGGCATGC TGGTGCTGCC GCGTCTGAAT
TTGCGCGATA CCGGCGTCTG GCGGGTCATG AAGCAGATGC TGCCCGCGAT TCTGGGCGTC
TCCGTCAGTC AGATTTCTCT GATCATCAAC ACGATATTCG CCTCGTTCCT CGTCGCCGGT
TCCGTGTCGT GGATGTACTA CGCTGACCGA CTGATGGAAC TGCCGTCCGG TGTCCTGGGC
GTCGCGCTGG GGACGATTCT GCTGCCGATC CTGTCAAAGA CCTACGCGCA GCGCGACCGT
CAGGAATACT CGCGGATTCT CGACTGGGGC CTGCGTCTGT GTTTTGTGCT GGTGCTGCCC
TGCACGCTGG CGCTGGGCCT GCTCGCTGAA CCGTTGACCG TTTCGCTGTT TCAATACGGC
CAGTTCAATG CGCTGGACGC GGCCATGACC CAGCGTGCGC TGGTCGCCTA TTCGGTCGGT
TTGCTGGGTA TCATCCTGAT CAAAGTGCTG GCCCCAGGCT TTTATGCCCA ACAAAATATC
CGTACCCCGG TGAAAATCGC GATTTTCACC CTCATAGTGA CTCAGTTGCT CAACCTGGCG
TTTATCGTGC CTTTGCAGCA TGCCGGTCTG GCGCTGGCCA TCAGCGTGGG GGCGTGCATC
AATGCGGGGC TGCTGTTCTG GCAATTGCGC AGACAGGATC TGTTTCAGCC GCAACCGGGC
TGGACGAAAT TTCTGTTCAA GCTGATCGTT GCTGTCGCGG TCATGTCTGC TGTGCTGCTG
GGGCTCATGC ATGTCATGCC GGCCTGGGAC GAAGGTCATA TGCTGGAGCG TTTTCTGCGT
CTGGGTGCGC TGGTCGCGGC GGGGGTGGTG ACGTATTTCG CCATGCTTCT GATGCTGGGC
TTTCGCCTGA GGGATTTCGC CCGCAAGGCC ATTATGTAG
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| Protein sequence | MNLLKSLAAV SSITMVSRVL GFVRDTIIAR TFGAGMATDA FFIAFKLPNL LRRIFAEGAF
SQAFVPILAE YKSQQGEEAT RTFVAYVTGL LTLALAVVTL LGVIFAPWVI WATAPGFADT
PEKFALTSDL LRVTFPYILL ISLSSMAGAI LNTWNRFSVP AFVPTLLNVS MIFFALFLTP
YFAPPVMALG WAVLVGGLLQ LLYQLPHLKK IGMLVLPRLN LRDTGVWRVM KQMLPAILGV
SVSQISLIIN TIFASFLVAG SVSWMYYADR LMELPSGVLG VALGTILLPI LSKTYAQRDR
QEYSRILDWG LRLCFVLVLP CTLALGLLAE PLTVSLFQYG QFNALDAAMT QRALVAYSVG
LLGIILIKVL APGFYAQQNI RTPVKIAIFT LIVTQLLNLA FIVPLQHAGL ALAISVGACI
NAGLLFWQLR RQDLFQPQPG WTKFLFKLIV AVAVMSAVLL GLMHVMPAWD EGHMLERFLR
LGALVAAGVV TYFAMLLMLG FRLRDFARKA IM
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