Gene PSPTO_0742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0742 
Symbol 
ID1182362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp788635 
End bp789492 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content62% 
IMG OID637392117 
ProductMaoC-like domain protein 
Protein accessionNP_790589 
Protein GI28867970 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.81902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTC ATTGGCGCTA CCTCAATTCG CTACAACCGC TGTCCAACCT GTTCATTCAG 
GCGGCGCTCA GGCGCAAGGT AACCGGCACA CAGCTACCCG ATCTTGGGTT GCGCAGCTGG
ATCGCGGTCG ATAACGACAA GCTTGAAGCG TACCGCAAGG TCTGTGGGTT TGCAGACAGC
AGCCTGCTGC CGCCGACTTA CCCGCATGCG CTGGCTTTTA CGTTGCAGAT GCAATTGATG
ACCTCACCGG AGTTTCCCTT CCCGCTGCTG GGGCTCATTC ATCTGGGCAA TCAGATTCGC
ACCCTTCGCC CGCTCGGCGG CGTGAGCCAG TTGTACATCA GCGTGCAGGC CACCGACCTG
CGCCCGCACC CCAAAGGCGC GACGTTTACC TTGCTCACGC AGGCCGAGGA CGGAATGGGC
CTGCTATGGG AAGAAGAAAG CACTCTGCTG TGCACCGCCG TTCATCTTGA GGACGCGCCT
GTTCCAATGC CCGAAGCGTA CCTGCGACCG CTCATCGAGC TGGACCGCTG GCGGGCGTCT
GCACAGATCG GCCGCGAGTA CGCCAAGGTG TCTGGCGACT ACAACCCGAT TCACCTCAGC
GCCGCCAGCG CCAAGCTATT CGGCTTCCCA CGCGCCATTG CCCACGGCAT GTGGCTCAAG
GCACGTGCGC TCGCAGCACT GGAAGATCAC CTGCCCGCCT CGAACGTCCA GATCAGCGTG
CAGTTCCAGA AACCGGTACG CCTGCCCGCC GATGTCACGC TGTCGGCCAG CGCCGCCGGT
TCCCACGGTG AGTTTCGTGT CGAAGGCCAG GAAGGTATCG TGCACATGAT CGGTAGCTGG
CAACCGGCTA CGGATTGA
 
Protein sequence
MTAHWRYLNS LQPLSNLFIQ AALRRKVTGT QLPDLGLRSW IAVDNDKLEA YRKVCGFADS 
SLLPPTYPHA LAFTLQMQLM TSPEFPFPLL GLIHLGNQIR TLRPLGGVSQ LYISVQATDL
RPHPKGATFT LLTQAEDGMG LLWEEESTLL CTAVHLEDAP VPMPEAYLRP LIELDRWRAS
AQIGREYAKV SGDYNPIHLS AASAKLFGFP RAIAHGMWLK ARALAALEDH LPASNVQISV
QFQKPVRLPA DVTLSASAAG SHGEFRVEGQ EGIVHMIGSW QPATD