| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0729 |
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| Symbol | mpl |
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| ID | 1182349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 778928 |
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| End bp | 780277 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392104 |
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| Product | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
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| Protein accession | NP_790576 |
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| Protein GI | 28867957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.511021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACATTC ATATCCTTGG TATCTGCGGC ACGTTCATGG GTTCGCTGGC GGTACTCGCC
AAAGAGTTGG GGCATCGGGT CACCGGCTCC GACGCCAACG TCTACCCGCC GATGAGTACC
CAGCTCCAGG CCCAGGGTAT CGAGCTGACT CAGGGTTACG ACCCTGTGCA GCTGGTTCCG
GCGCCGGATC TGGTGGTGGT CGGCAACGCA CTGTCGCGTG GCAATCCGTC GGTTGAATAT
GTCCTGAATA AAGGTTTGCC ATATGTGTCT GGCCCGCAAT GGCTGGCAGA CCACGTGTTG
CAGGGTCGCT GGGTACTGGC GGTAGCCGGC ACGCACGGCA AGACCACCAC CAGCAGCATG
CTGGCCTGGG TGTTGGAGCA CGCGGGCATG AGCCCTGGCT TTCTGATCGG CGGTATCCCG
CAGAATTTCG CGGTGTCGGC GCGCCTGGGG GAAACCCCGT TCTTTGTGGT GGAAGCCGAC
GAATACGACA GTGCCTTCTT CGACAAGCGC TCCAAGTTCG TTCATTACCG CCCGCGTACT
GCGATCCTCA ACAACCTTGA GTTCGATCAC GCCGACATTT TCCCCGATCT GCCCGCCATC
GAGCGCCAGT TTCACCATCT GGTGCGCACC ATTCCGAGCG AAGGCCTGGT GATTCATCCG
ACCACCGAGC CTGCGCTGTC ACGCGTCATC AAGATGGGCT GCTGGACACC GGTGCAAACC
ACAGGCGAGG GCGGTCAGTG GCAGGCACGG TTGTTGAGTG AAGACGGTTC GCGTTTTGAA
GTGCTGTTCG AGGGCGAGCT GCAGGGCGCG GTCGAATGGG ACATGACTGG CCTGCACAAC
GTCGCCAATG CGCTGGCGAC CCTCGCTGCA GCCCGTCACG TCGGTGTTGT TCCGCTGCTG
GGCGTGCAGG CATTGAGCGC GTTCAAAAGC GTCAAGCGCC GTATGGAAAA GGTCGCCGAC
GTGCACGGCA TCACTATTTA TGACGACTTC GCTCATCACC CGACCGCGAT TGCCACCACG
CTGGATGGCC TGCGCAAAAA GGTTGGTGAT GCACCGATCA TTGCCGTGAT CGAGCCGCGT
TCCAACTCCA TGAAGCTGGG CGCGCACCGC GACGGTCTGC CGGAAAGTGT GCAGCAGGCT
GATCAGGTGG TCTGGTACGC GCCACCCAAT CTGGGTTGGG ACCTGGCTGC AACAGTCGCC
GGAGGCACTG TGCCTGCGTT GGTCTGTGAT TCCCTTGAGG CAATCATCGC CCAGGTCAAA
AGCCAGGCGC AGCCCGGTAC GCACATTGTC ATCATGAGTA ACGGCGGTTT TGGCGGCCTG
CATGGCAAGC TCGCGGAGGC GTTGCAATGA
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| Protein sequence | MHIHILGICG TFMGSLAVLA KELGHRVTGS DANVYPPMST QLQAQGIELT QGYDPVQLVP
APDLVVVGNA LSRGNPSVEY VLNKGLPYVS GPQWLADHVL QGRWVLAVAG THGKTTTSSM
LAWVLEHAGM SPGFLIGGIP QNFAVSARLG ETPFFVVEAD EYDSAFFDKR SKFVHYRPRT
AILNNLEFDH ADIFPDLPAI ERQFHHLVRT IPSEGLVIHP TTEPALSRVI KMGCWTPVQT
TGEGGQWQAR LLSEDGSRFE VLFEGELQGA VEWDMTGLHN VANALATLAA ARHVGVVPLL
GVQALSAFKS VKRRMEKVAD VHGITIYDDF AHHPTAIATT LDGLRKKVGD APIIAVIEPR
SNSMKLGAHR DGLPESVQQA DQVVWYAPPN LGWDLAATVA GGTVPALVCD SLEAIIAQVK
SQAQPGTHIV IMSNGGFGGL HGKLAEALQ
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