Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0723 |
Symbol | |
ID | 1182343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 772437 |
End bp | 773246 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392098 |
Product | hypothetical protein |
Protein accession | NP_790570 |
Protein GI | 28867951 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTCAT TGCGCAATTG GCGCAGGCGA CGAACCCTCG CCAGGCATCC GGTTGCTGAA GAACTGTGGC AGCAGGTGCG CAAGCGTCTG CCGATCCTCG ATGGCTTAAG TACCGAGCAG GACGCACACC TGCGCGACGC CTGCGTGCTG TTTCTGAACG ACAAACACCT GAGCGCGCTG CCGGGTGTAG AGCTGGACGA CGAACAAAGG CTGTTTCTCG CCGCGCAAGC GCAATTGCCG CTGCTCAGCC TGGGCGAACT GAACTGGTAT CAGGGCTTTC ACGAGATCGT GCTGTACCCC GACGACTTCG TCAGCCCGCA GCGCCATCGC GATGCAAGTG GCGTGGAACA TGAGTGGGAT GGCGAACACA GCGGCGAGGC ATGGCTGCAA GGCCCGGTGA TTCTGGCCTG GCCGGGCGTG CTGAGCAGCG GCGACTGGGA CGGCTACAAC CTGGTCATCC ACGAACTGGC GCACAAGCTC GACATGCTCA ACGGCGACGC CAACGGCCTG CCACCGCTGC ACAGCGACAT GCGGGTGACC GACTGGGCCA GCGTCATGCA AAGCGCATTC GACGACCTCA ACCGGCAGCT GGATCAGGAC CCGGATGCAC AAACCGTCAT CGACCCCTAT GCCGCACAAG ACCCTGGCGA GTTTTTCGCC GTGACCAGCG AGTACTTCTT CAGCGCACCC GACCTGCTGC ACGAAAGCTA CCCGGCGGTC TACGCACAAC TTCAGGCGTT CTACCGTCAG GACACCCTCG CGCGGCTAAA TGCGTTGCGT CATCAGGACC CGGCTTATCG GGACCACTGA
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Protein sequence | MWSLRNWRRR RTLARHPVAE ELWQQVRKRL PILDGLSTEQ DAHLRDACVL FLNDKHLSAL PGVELDDEQR LFLAAQAQLP LLSLGELNWY QGFHEIVLYP DDFVSPQRHR DASGVEHEWD GEHSGEAWLQ GPVILAWPGV LSSGDWDGYN LVIHELAHKL DMLNGDANGL PPLHSDMRVT DWASVMQSAF DDLNRQLDQD PDAQTVIDPY AAQDPGEFFA VTSEYFFSAP DLLHESYPAV YAQLQAFYRQ DTLARLNALR HQDPAYRDH
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