Gene PSPTO_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0723 
Symbol 
ID1182343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp772437 
End bp773246 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content62% 
IMG OID637392098 
Producthypothetical protein 
Protein accessionNP_790570 
Protein GI28867951 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCAT TGCGCAATTG GCGCAGGCGA CGAACCCTCG CCAGGCATCC GGTTGCTGAA 
GAACTGTGGC AGCAGGTGCG CAAGCGTCTG CCGATCCTCG ATGGCTTAAG TACCGAGCAG
GACGCACACC TGCGCGACGC CTGCGTGCTG TTTCTGAACG ACAAACACCT GAGCGCGCTG
CCGGGTGTAG AGCTGGACGA CGAACAAAGG CTGTTTCTCG CCGCGCAAGC GCAATTGCCG
CTGCTCAGCC TGGGCGAACT GAACTGGTAT CAGGGCTTTC ACGAGATCGT GCTGTACCCC
GACGACTTCG TCAGCCCGCA GCGCCATCGC GATGCAAGTG GCGTGGAACA TGAGTGGGAT
GGCGAACACA GCGGCGAGGC ATGGCTGCAA GGCCCGGTGA TTCTGGCCTG GCCGGGCGTG
CTGAGCAGCG GCGACTGGGA CGGCTACAAC CTGGTCATCC ACGAACTGGC GCACAAGCTC
GACATGCTCA ACGGCGACGC CAACGGCCTG CCACCGCTGC ACAGCGACAT GCGGGTGACC
GACTGGGCCA GCGTCATGCA AAGCGCATTC GACGACCTCA ACCGGCAGCT GGATCAGGAC
CCGGATGCAC AAACCGTCAT CGACCCCTAT GCCGCACAAG ACCCTGGCGA GTTTTTCGCC
GTGACCAGCG AGTACTTCTT CAGCGCACCC GACCTGCTGC ACGAAAGCTA CCCGGCGGTC
TACGCACAAC TTCAGGCGTT CTACCGTCAG GACACCCTCG CGCGGCTAAA TGCGTTGCGT
CATCAGGACC CGGCTTATCG GGACCACTGA
 
Protein sequence
MWSLRNWRRR RTLARHPVAE ELWQQVRKRL PILDGLSTEQ DAHLRDACVL FLNDKHLSAL 
PGVELDDEQR LFLAAQAQLP LLSLGELNWY QGFHEIVLYP DDFVSPQRHR DASGVEHEWD
GEHSGEAWLQ GPVILAWPGV LSSGDWDGYN LVIHELAHKL DMLNGDANGL PPLHSDMRVT
DWASVMQSAF DDLNRQLDQD PDAQTVIDPY AAQDPGEFFA VTSEYFFSAP DLLHESYPAV
YAQLQAFYRQ DTLARLNALR HQDPAYRDH