Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0722 |
Symbol | ppa-1 |
ID | 1182342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 771799 |
End bp | 772326 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392097 |
Product | inorganic pyrophosphatase |
Protein accession | NP_790569 |
Protein GI | 28867950 |
COG category | [C] Energy production and conversion |
COG ID | [COG0221] Inorganic pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACA GCAAGATTCC GGCCGGTAAA GACCTGCCGA ACGACATCTA CGTCGCGATC GAAATCCCGG CCAACCATGC GCCGATCAAG TACGAAATCG ACAAAGACAC CGATTGCCTG TTCGTTGACC GTTTCATGGC CACCCCGATG TTCTACCCGG CCAACTACGG TTTCATCCCT AACACCCTGG CTGACGACGG CGACCCGCTG GACGTGCTGG TGGTCACCCC TTACCCGGTT ACCCCAGGCT CGGTCATCCG CGCACGCCCG GTCGGCATTC TGCACATGAC TGACGACGGC GGCGGCGATG CCAAAGTCAT CGCAGTACCC CACGACAAGC TGTCCCAGCT GTATGTCGAC GTGAAAGAGT ACACCGACCT GCCAGCCCTG CTGCTTGAGC AGATCAAGCA CTTCTTCGAG AACTACAAGG ATCTCGAGAA AGGCAAATGG GTGAAGATCG AAGGTTGGGG CAACGCTGAC GCTGCCCGTG CCGAGATCAT GAAATCGGTA GAAGCGTTCA AAGGCTGA
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Protein sequence | MSYSKIPAGK DLPNDIYVAI EIPANHAPIK YEIDKDTDCL FVDRFMATPM FYPANYGFIP NTLADDGDPL DVLVVTPYPV TPGSVIRARP VGILHMTDDG GGDAKVIAVP HDKLSQLYVD VKEYTDLPAL LLEQIKHFFE NYKDLEKGKW VKIEGWGNAD AARAEIMKSV EAFKG
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