Gene PSPTO_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0687 
Symbol 
ID1182307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp742244 
End bp742897 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID637392062 
Producthypothetical protein 
Protein accessionNP_790534 
Protein GI28867915 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGCCC CGCAACATCT GCAACACGCG TTGAGCGAAC TGCTTGGCGA CGCCCGGCTG 
GTTGTCACTG CGCTGCCGGG CACAGAGCTG AAGCTGTGGC TGATCGACGA GGCCAACATG 
GACCGCGCCT TCAGCCCGGA TGAAACGCGC CGTATTCTGG AAGATCCACC GTACTGGAGC 
TTCTGCTGGG CGAGTGGCCT GGCCCTGGCG CGTTTTCTGG CTGAAAACCC GCACTGGGTG 
GCTGGCAAGC GGGTACTGGA CTTCGGTGCG GGCTCGGGTG TGGCGGGCAT TGCTGCGCTC 
AGGGCCGGGG CGCTTGAAGT GGTTGCCTGT GATCTCGATC CACTGGCGCT CGCTGCCTGC 
CGGGCCAATG CCGAACTCAA TCAGGTGCCA TTTAGCTACT CGACGGATTT CTTTGCCGAG 
GCGGACCGCT TCGATCTGAT TCTGGTCGCC GACGTGCTCT ACGACCGCGC CAACCTGCCG 
CTGCTGGACC AGTTTCTCTC CCGAGGCCGC GAGGCATTGG TGGCAGACTC CCGCGTGCGC 
GACTTCAAGC ACGCTGCCTA CCAGCGTGTG ACGATACTGC ATGCGCACAC CCTGCCGGAC 
CTGGCCGAGC CGCACGAGTT TCGCGACGTG AGTGTGTATC ACGCGGCGCG GTGA
 
Protein sequence
MIAPQHLQHA LSELLGDARL VVTALPGTEL KLWLIDEANM DRAFSPDETR RILEDPPYWS 
FCWASGLALA RFLAENPHWV AGKRVLDFGA GSGVAGIAAL RAGALEVVAC DLDPLALAAC 
RANAELNQVP FSYSTDFFAE ADRFDLILVA DVLYDRANLP LLDQFLSRGR EALVADSRVR 
DFKHAAYQRV TILHAHTLPD LAEPHEFRDV SVYHAAR