| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0648 |
|---|
| Symbol | rpsM |
|---|
| ID | 1182268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 702336 |
|---|
| End bp | 702692 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637392023 |
|---|
| Product | ribosomal protein S13 |
|---|
| Protein accession | NP_790495 |
|---|
| Protein GI | 28867876 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.945062 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGTA TTGCAGGCGT TAACATTCCA GATAACAAGC ATACTGTTAT CTCGCTGACC
TACATCTATG GTGTTGGTCG CACCACCGCA CAGAAAATTT GTGCAACCAC CGGGGTCAAC
CCGGCGGTGA AAATCAAAGA TCTGAGCGAC GAGCAGATTG AACAGCTGCG TGGCGAAGTG
GCGAAGTTCA CCACTGAAGG TGACCTGCGT CGCGAAATCA ACATGAAAAT CAAGCGCTTG
ATGGACCTGG GCTGCTACCG CGGTCTGCGT CATCGTCGTG GTCTTCCAGT GCGCGGTCAG
CGTACCAAGA CCAACGCGCG TACTCGCAAA GGTCCGCGTA AGCCGATCCG CAAGTAA
|
|---|
| Protein sequence | MARIAGVNIP DNKHTVISLT YIYGVGRTTA QKICATTGVN PAVKIKDLSD EQIEQLRGEV
AKFTTEGDLR REINMKIKRL MDLGCYRGLR HRRGLPVRGQ RTKTNARTRK GPRKPIRK
|
|---|
| |