Gene PSPTO_0645 details

Gene Information

• Locus tag: PSPTO_0645
• Symbol: rplO
• ID: 1182265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 700291
• End bp: 700725
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392020
• Product: ribosomal protein L15
• Protein accession: NP_790492
• Protein GI: 28867873
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.182127
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA ATGATCTGAG TCCAGCGCCG GGTTCCCGTC GCGAAAAGCA TCGTCCGGGC 
CGTGGTATCG GTAGCGGTTT GGGCAAGACC GGTGGCCGTG GCCACAAAGG TCAAAGCTCC 
CGCTCCGGTG GCACTATTGC TCCGGGCTTT GAGGGCGGCC AACAGCCGCT GCATCGTCGC 
CTGCCAAAAT TCGGTTTCGT TTCCCTGAAG GCCATGGATC GCGCAGAAGT GCGTCTGTCC 
GAGCTGGCTA AAGTGGAAGG CGACATCGTA ACTGTGCAGT CCCTGAAAGA TGCCAACGTG 
ATTAACCAGA ACGTACAGCG TGTGAAAATC ATGCTGTCGG GCGAAGTTAC TCGCGCTGTC 
ACTATCAAGG GTATCGCCGC CACCAAAGGT GCGCGTGCGG CTATCGAAGC AGCTGGCGGC 
AAGTTCGAGG AATAA 

 

Protein sequence

MKLNDLSPAP GSRREKHRPG RGIGSGLGKT GGRGHKGQSS RSGGTIAPGF EGGQQPLHRR 
LPKFGFVSLK AMDRAEVRLS ELAKVEGDIV TVQSLKDANV INQNVQRVKI MLSGEVTRAV 
TIKGIAATKG ARAAIEAAGG KFEE