Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0635 |
Symbol | rpsQ |
ID | 1182255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 696227 |
End bp | 696493 |
Gene Length | 267 bp |
Protein Length | 88 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637392010 |
Product | ribosomal protein S17 |
Protein accession | NP_790482 |
Protein GI | 28867863 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0186] Ribosomal protein S17 |
TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000269745 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAG CCGAAAAAAC TGTCCGTACG CTGACTGGCC GTGTTGTCAG CGACAAGATG GACAAGACCA TCACCGTTCT GATCGAGCGT CGCGTAAAGC ACCCGATCTA CGGTAAATAC GTTAAGCGTT CGACTAAGCT GCACGCGCAC GACGAAACCA ACCAGTGCCA TATCGGCGAC AAGGTCACTA TTCGTGAAAC TCGTCCGGTA GCCAAGACCA AGTCTTGGGC GTTGGTTGAT ATCCTCGAAC GCGCTGTGGA AGTCTAA
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Protein sequence | MAEAEKTVRT LTGRVVSDKM DKTITVLIER RVKHPIYGKY VKRSTKLHAH DETNQCHIGD KVTIRETRPV AKTKSWALVD ILERAVEV
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