Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0614 |
Symbol | nusG |
ID | 1182234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 675341 |
End bp | 675874 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637391989 |
Product | transcription antitermination protein NusG |
Protein accession | NP_790461 |
Protein GI | 28867842 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.332962 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCTAAGC GTTGGTACGT AGTGCATGCA TACTCGGGTT ACGAGAAGCA TGTCATGCGC TCGTTGGTCG AGCGTGTGAA GCTGGCAGGC ATGGAAGATG GCTTCGGCGA AATTCTGGTT CCCACTGAAG AAGTGGTTGA AATGCGTAAT GGCCAGAAAC GCAAAAGCGA ACGCAAGTTC TTCCCTGGTT ATGTGCTGGT TCAGATGGAC ATGAATGAAG GTACTTGGCA TTTGGTCAAG GATACCCCTC GTGTCATGGG CTTCATCGGT GGTACTGCTG ATAAGCCTGC TCCGATCACC GACAAAGAAG CAGAAGCGAT TCTGCGTCGC GTTGCTGACG GTAGCGACAA GCCGAAGCCG AAGACGCTGT TCGAGCCGGG TGAGGTTGTT CGTGTCACTG ACGGTCCGTT CGCCGATTTC AACGGCACCG TTGAAGAAGT TAACTACGAA AAGAGCCGTA TCCAAGTTGC GGTGCTCATT TTCGGACGCT CTACCCCGGT AGAGTTAGAG TTCAGTCAGG TCGAGAAGGC CTAG
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Protein sequence | MAKRWYVVHA YSGYEKHVMR SLVERVKLAG MEDGFGEILV PTEEVVEMRN GQKRKSERKF FPGYVLVQMD MNEGTWHLVK DTPRVMGFIG GTADKPAPIT DKEAEAILRR VADGSDKPKP KTLFEPGEVV RVTDGPFADF NGTVEEVNYE KSRIQVAVLI FGRSTPVELE FSQVEKA
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