Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0612 |
Symbol | |
ID | 1182228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 673819 |
End bp | 674247 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637391983 |
Product | hypothetical protein |
Protein accession | NP_790459 |
Protein GI | 28867840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.653535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTGGT TGTTTCTTCT GCTGTTGATG CTCAATGGCT TCTATTACCT GTGGCATCAG CAGGAGGCTC CGTTGAGGGC CAAAGAGGTC ATGCCTCTAT CGCTGCATCG CGCCACGCAG CAGGATATCC GCCTGCTTAG CGAGTCAGAT GCAAATCGAG TGTCGCAAGA TGCCGACACG AAGTGTCTCT ATCTGGGTGG CTTCCCCAGG CAGGAAGACG CTCGGCTGGT TGAGCAGCGA TTGAACAGCC TGGATATCCA GTCACAATTT CGGCCCCTGC AATCCGGTGG CTCGACAGCC TATTGGCTGA AAATCATCCC GGAAAGTCGT CGTCTTGTAG AGGCGAGTGT CATGACTCAG CTGAGCCAGG ATTTTCCGCA ATTAAAAAAT CAAATAATGT CGTGTGAGGC CATTGCAACT GCCGAGTAG
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Protein sequence | MRWLFLLLLM LNGFYYLWHQ QEAPLRAKEV MPLSLHRATQ QDIRLLSESD ANRVSQDADT KCLYLGGFPR QEDARLVEQR LNSLDIQSQF RPLQSGGSTA YWLKIIPESR RLVEASVMTQ LSQDFPQLKN QIMSCEAIAT AE
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