Gene PSPTO_0571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0571 
Symbol 
ID1182182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp628136 
End bp628783 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content60% 
IMG OID637391938 
Productrepressor protein c2 
Protein accessionNP_790418 
Protein GI28867799 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.72773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA AATGGTATGA AGTCGCAAGA CAGGTCATGG AAACCCAGGA AATCAGCCAG 
GAAGAAATGG CTGAGCGCAT GGGCGTTACC CCCGGCGCGG TGGGGCATTG GCTCAACGGC
AAACGCGAAC CGAAGATCGA GGTCATCAAT CGATTGCTGG GTGAGCTGGG CCTGCCGATC
CTCGCGACCT CGATCCCGTC GAGCGAGCCG GGCATGCAAA ACGTGGCGCC TACGGTGCAG
CCTTCGCGTT TCTATCGGTA CCCGGTTATC AGTTGGGTCG AGGCCGGCGG CTGGAGCGAG
GCGGTCGAGC CCTACCCTGC GGGTTATTCC GACACCTTCG AGATCAGCGA CTATAAAGCC
AAGGGCCGCG CCTTCTGGCT GGTGGTGCGT GGCGACTCGA TGACTGCGCC CGCAGGCCAG
AGCATTCCTG AAGGCATGCT GATCCTGGTG GACACCGGAA TCGAGCCCAC GGCCGGCAAG
CTGGTGATCG CCAAGCTGCC GGAAAGCAAC GAGGCCACCT TCAAAAAACT GGTCGAAGAT
GCCGGACGCT ATTTTCTCAA GCCGTTGAAC CCCGCCTATC CGACCCTCCC GGTCACCGAA
GACTGCAAGC TGATCGGGGT CATCAGGCAA ATGACGATGC GCTTGTGA
 
Protein sequence
MNRKWYEVAR QVMETQEISQ EEMAERMGVT PGAVGHWLNG KREPKIEVIN RLLGELGLPI 
LATSIPSSEP GMQNVAPTVQ PSRFYRYPVI SWVEAGGWSE AVEPYPAGYS DTFEISDYKA
KGRAFWLVVR GDSMTAPAGQ SIPEGMLILV DTGIEPTAGK LVIAKLPESN EATFKKLVED
AGRYFLKPLN PAYPTLPVTE DCKLIGVIRQ MTMRL