| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0565 |
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| Symbol | |
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| ID | 1182175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 621103 |
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| End bp | 621924 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391932 |
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| Product | polyamine ABC transporter, permease protein |
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| Protein accession | NP_790412 |
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| Protein GI | 28867793 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.903035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAATG CCTACACATC GCCGATCGAG CGCATCTGGT ATTACGCCTT GCGCATCCTC
TGCGCGCTGA TCCTGCTCTT TCTCGTGTTG CCGGTGCTGG TCATCGTGCC GTTGTCGTTC
AATTCGGGGA GCTTTCTGGT CTATCCGCTG CAAGGCTTTT CGTTGCAGTG GTACCAGGAC
TTCTTCAATT CTGCCGAGTG GATGCGGGCG CTGAAAAACA GCATGATCGT CGCCCCGGCC
GCGACCCTGT TGGCAATGGG CTTCGGCACG CTTGCGGCGA TCGGCCTGAC CCGGGGCAAT
TTTCCCGGCA AGGCGCTGGT CATGGCCTTG GTGATTTCGC CGATGGTGGT GCCGGTGGTG
ATCGTTGGTG TGGCCAGTTA CCTGTTCTTC GCGCCACTGG GCCTGGGTAA CAGCTACACC
TCGCTGATTC TGGTCCACGC CGTGCTGGGT GTGCCGTTCG TGATCATTAC CGTGTCGGCG
ACCTTGCAGG GCTTCAACCA CAACCTGGTA CGCGCTGCGG CAAGCCTCGG TGCGTCGCCG
CTGACCGCTT TCCGCCGTGT GACCCTGCCG TTGATTGCGC CGGGGGTGAT TTCCGGTGCG
CTGTTCGCCT TTGCGACGTC GTTCGACGAA GTGGTTGTGA CGCTGTTTCT CGCCGGGCCG
GAACAGGCAA CCTTGCCCCG GCAGATGTTC AGCGGCATCC GCGAAAACCT CAGCCCGACC
ATCGCAGCGG CCGCGACGCT ACTGATCGGC TTCTCGGTGC TGTTACTGCT GGTGCTGGAA
TGGCTGAGAG GGCGTAGCGA GAAACTGAGA ACGGCTCAGT GA
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| Protein sequence | MLNAYTSPIE RIWYYALRIL CALILLFLVL PVLVIVPLSF NSGSFLVYPL QGFSLQWYQD
FFNSAEWMRA LKNSMIVAPA ATLLAMGFGT LAAIGLTRGN FPGKALVMAL VISPMVVPVV
IVGVASYLFF APLGLGNSYT SLILVHAVLG VPFVIITVSA TLQGFNHNLV RAAASLGASP
LTAFRRVTLP LIAPGVISGA LFAFATSFDE VVVTLFLAGP EQATLPRQMF SGIRENLSPT
IAAAATLLIG FSVLLLLVLE WLRGRSEKLR TAQ
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