Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0556 |
Symbol | |
ID | 1182166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 611814 |
End bp | 612446 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637391923 |
Product | nucleotidyltransferase family protein |
Protein accession | NP_790403 |
Protein GI | 28867784 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCCGT TGACCCTGCA TACACCCAAG CCGCTGGTGC GTGCGGGCGG CATTCCGTTG ATCGAGTACC ACCTGAACGC CTTACGTGCA GCAGGGTTTC ACCAATTGGT GATCAACCAT GCGTGGCTGG GCCAGCAGAT CGAGGATTAC CTGGGGGACG GTCAGCGTTT CGACCTGAGC ATCCGCTATT CCGCCGAAGG TCAGCCGCTG GAAACCGGCG GCGGTATCCA GCGGGCGCTG CCACTGCTGG GCGCCGAGCC TTTTGTGGTG GTCAATGGTG ATGTCTGGAC CGATTACGAT TTCGGCGCAT TGCGCATGCC GCTTGCCGGC CTGGCGCATC TGGTGCTGAT CGACAACCCC GCACACCACC CCACCGGCGA TTTTTCGCTG GTCGACGGCC AGGTGCGCGA TGACGATTCG GCTGGCCTGC GCCTGACCTA CAGCGGCATC GCCATCCTGC ATCCGCAACT GTTTGCCGAC TGCGAGCCTG GTGCCTTCAA GCTTGCGCCG TTGTTGCGCG AGGCCATGCA TCAAGGGCTG GTAACGGGTG AGCACTTCAA AGGGCGCTGG GTCGATGTCG GCACCCATGA ACGCCTGGCA GAAGTCGAGC AGTTGCTTGC GGAGACGCGC TGA
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Protein sequence | MRPLTLHTPK PLVRAGGIPL IEYHLNALRA AGFHQLVINH AWLGQQIEDY LGDGQRFDLS IRYSAEGQPL ETGGGIQRAL PLLGAEPFVV VNGDVWTDYD FGALRMPLAG LAHLVLIDNP AHHPTGDFSL VDGQVRDDDS AGLRLTYSGI AILHPQLFAD CEPGAFKLAP LLREAMHQGL VTGEHFKGRW VDVGTHERLA EVEQLLAETR
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