| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0540 |
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| Symbol | gcp |
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| ID | 1182150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 593605 |
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| End bp | 594630 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637391907 |
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| Product | O-sialoglycoprotein endopeptidase |
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| Protein accession | NP_790387 |
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| Protein GI | 28867768 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGTAC TGGGATTAGA AACCTCCTGC GACGAAACCG GCGTCGCGTT GTACGACAGC
GAACGCGGTT TGCTGGCGGA CGCTTTATTC AGTCAGATCG ACCTGCACCG CGCTTATGGC
GGTGTGGTGC CGGAGCTGGC TTCGCGTGAT CACGTCAAGC GCATGCTGCC CCTGATCCGC
CAGACACTGG CCGAGGCCGA CTGCGTCGCG ACCGACATCG ACGCCATCGC CTACACCGCA
GGGCCGGGCC TTGTGGGCGC GTTGCTGGTC GGCGCGTCGT GCGCGCAGGC GCTGGCGTTT
GCCTGGGATA TTCCGGCGCT GGGTGTTCAC CACATGGAAG GCCATCTGCT GGCCCCGATG
CTGGAAGAAA ACCCGCCGCA GTTTCCGTTC GTCGCTTTGT TGGTGTCCGG CGGGCACACG
CAGCTGGTGC GCGTCGATGG CATCGGTCAG TACGAGCTGC TGGGCGAGAC GCTGGATGAT
GCCGCAGGCG AGGCGTTCGA CAAGACCGCC AAGATGATGG GCATGCAGTA TCCGGGCGGC
CCGGAGATCT CGAAAGCGGC CTTGCAGGGC GTGCCGGGGC GTTTTGTCTT CCCTCGGCCG
ATGACCGATC GCCCCGGGTT GGCGTTCAGT TTCAGCGGCC TGAAAACCTC GGCGCTCAAC
ACCTGGCAGC AGTGCCAGAG TGCCGGGGAC GACAGTGAGC AAACCCGCTG CGACATCGCT
CTGGCCTTCC AGCAGGCGGT AGTGGAGACT TTGACCATCA AGTGCAAGCG CGCGCTCAAG
CAGACCGGGC TCAAGAGTCT GGTCATCGCA GGCGGCGTCA GCGCCAACAA GGCGTTGCGG
GTATCGCTGG AAAGCATGCT CGGTGAGTTG CGCGGGCACG TTTACTACGC GCGGCCGGAA
TTCTGTACTG ACAACGGCGC GATGATCGCC TTTGCCGGCT GCCAGCGTCT GCAGGCCGGG
CAGAAAGAAG ATTTGAGCAT CAGCGTGCAG GCGCGCTGGC CCATGGAGCA GTTGTCGGGG
CTCTAG
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| Protein sequence | MLVLGLETSC DETGVALYDS ERGLLADALF SQIDLHRAYG GVVPELASRD HVKRMLPLIR
QTLAEADCVA TDIDAIAYTA GPGLVGALLV GASCAQALAF AWDIPALGVH HMEGHLLAPM
LEENPPQFPF VALLVSGGHT QLVRVDGIGQ YELLGETLDD AAGEAFDKTA KMMGMQYPGG
PEISKAALQG VPGRFVFPRP MTDRPGLAFS FSGLKTSALN TWQQCQSAGD DSEQTRCDIA
LAFQQAVVET LTIKCKRALK QTGLKSLVIA GGVSANKALR VSLESMLGEL RGHVYYARPE
FCTDNGAMIA FAGCQRLQAG QKEDLSISVQ ARWPMEQLSG L
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