| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0497 |
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| Symbol | bioC |
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| ID | 1182106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 544061 |
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| End bp | 544870 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391865 |
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| Product | biotin synthesis protein BioC |
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| Protein accession | NP_790346 |
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| Protein GI | 28867727 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.572424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGACC TTTCACATCC CAAGCCGCCC TCGGTATTGC CTGACAAGCG CCAGGTTGCA
GCATCGTTTT CCCGAGCGGC AGGCAGTTAC GACAGCGTGG CCGAGTTGCA GCGCAGTGTC
GGCAGCGAAC TGCTGTCTCG TCTGCCTGCC GGGTTCACGC CTTCGCCCTG GCTGGATCTG
GGGTGCGGCA CCGGCTATTT CAGTCGTGCG CTGGCCCGGA CATTCAGCCA AAGCGAAGGC
ATCGCGCTGG ACATCGCCGA AGGCATGTTG CGCCATGCGC AGCCGTTGGG CGGCGCGCAG
CATTTTGTCG CTGGTGACGC CGAGCGCTTG CCGTTGCGCG ACGAGCGCTG CGAGCTGATT
TTCTCCAGCC TCGCCGTGCA GTGGTGCGCC GACTTTGCGG CAGTGCTTAG CGAAGCTCAT
CGCGTATTGT CGCCGGGCGG CGTGTTTGCC TTCGCCAGCC TGTGCGTCGG CACGCTGTAC
GAATTGCGTG ACAGTTGGCG TGCCGTTGAC GGCCAGGTGC ATGTGAATCG CTTTCGTCAC
GAAGATGACT ACCGCCAGTT GTGCGCGGCC AGCGGCCTGC GGGTGCGCAG CCTTGAAGTG
CGTCCGCAGG TGCTGCATTA CCCGGACGTG CGCAGCCTGA CCCATGAGTT GAAGGCGCTC
GGTGCCCACA ACCTTAACCC TGGGCGGCAC AACGGCCTGA CCGGGCGCGA GCGGATTCTG
GGCATGGTCC AGGCCTACGA AGGTTTTCGT CAGCCAGCCG GGCTGCCTGC CACGTATCAA
GTGGTTTATG CAGTGCTTGA AAAAGCCTGA
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| Protein sequence | MTDLSHPKPP SVLPDKRQVA ASFSRAAGSY DSVAELQRSV GSELLSRLPA GFTPSPWLDL
GCGTGYFSRA LARTFSQSEG IALDIAEGML RHAQPLGGAQ HFVAGDAERL PLRDERCELI
FSSLAVQWCA DFAAVLSEAH RVLSPGGVFA FASLCVGTLY ELRDSWRAVD GQVHVNRFRH
EDDYRQLCAA SGLRVRSLEV RPQVLHYPDV RSLTHELKAL GAHNLNPGRH NGLTGRERIL
GMVQAYEGFR QPAGLPATYQ VVYAVLEKA
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