Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0495 |
Symbol | bioF |
ID | 1182104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 542154 |
End bp | 543344 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637391863 |
Product | 8-amino-7-oxononanoate synthase |
Protein accession | NP_790344 |
Protein GI | 28867725 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTCG ATCTCCGCAC GCGCCTTGAT GCCCGTCGCA CCGCACACCT CTATCGCCAG CGCCCACTGC TGCAAAGCCC GCAAGGCCCG CATGTCATTG TTGATGGTCA GCCATTGCTG GCGTTCTGTA ACAACGACTA CATGGGCCTG GCCAACCATC CCGAAGTGAT CGCGGCCTGG CAGGCAGGTG CCGAGCGCTG GGGCGTGGGC GGCGGGGCAT CGCATCTGGT GATCGGCCAC AGCACGCCGC ACCATGAACT GGAAGAAGCG TTGGCCGAAT TGACCGGACG TCCGCGAGCG CTGTTGTTCT CCAACGGTTA CATGGCCAAC CTCGGTGCGG TCACAGCCCT GGTCGGGCAG GGCGACACGG TGCTGGAAGA CCGCCTCAAT CACGCTTCGC TGCTGGACGC CGGTTTGCTC AGCGGCGCAC GCTTTTCCCG CTATCTGCAC AACGACGCCG GCAGTTTGAA CGCGCGTCTG GAAAAAGCCG TGGGCGATAC GCTGGTGGTG ACAGACGGCG TGTTCAGCAT GGACGGCGAT ATCGCTGACT TGCCCGCGCT GGCGCAGGCT GCCAAGGCCA AGGGCGCCTG GCTGATGGTC GACGATGCCC ATGGCTTCGG GCCGCTGGGT GCCAATGGCG CAGGTATCGT CGAGCATTTC GGCCTGAGCA TGGAGGATGT GCCGGTGTTG GTCGGCACCC TCGGCAAATC GTTCGGCACC TCCGGGGCAT TCGTGGCGGG CAGCGAAGAA TTGATCGAAA CCCTGATCCA GTTCGCCCGT CCGTACATCT ACACCACCAG CCAGCCACCT GCGCTGGCCT GCGCCACGCT GAAAAGCCTG CAATTGTTGC GCAGCGAGCA TTGGCGTCGT GAGCATCTGG CGAGTTTGAT CGGCCAGTTT CGTCGCGGCG CCGAGCAGCT CGGTCTGCAA TTGATGGACA GCTTCACGCC GATCCAGCCG ATCATGATCG GCGATGCCGG GCGCGCATTG CGTCTGTCGC AGTTGCTCCG TGAGCGCGGC TTGCTGGTGA CGGCGATTCG TCCGCCGACC GTGCCTGCGG GCAGCGCTCG TTTACGCGTG ACGTTGTCTG CTGCGCACAG CGAGGCTGAC GTGCAGCTAT TATTGGAAGC TCTGGAGCAG TGCTACCCGC TGCTGGATGC AAGTGAATCC ACGGAGCCCG TCCATGCGTG A
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Protein sequence | MSFDLRTRLD ARRTAHLYRQ RPLLQSPQGP HVIVDGQPLL AFCNNDYMGL ANHPEVIAAW QAGAERWGVG GGASHLVIGH STPHHELEEA LAELTGRPRA LLFSNGYMAN LGAVTALVGQ GDTVLEDRLN HASLLDAGLL SGARFSRYLH NDAGSLNARL EKAVGDTLVV TDGVFSMDGD IADLPALAQA AKAKGAWLMV DDAHGFGPLG ANGAGIVEHF GLSMEDVPVL VGTLGKSFGT SGAFVAGSEE LIETLIQFAR PYIYTTSQPP ALACATLKSL QLLRSEHWRR EHLASLIGQF RRGAEQLGLQ LMDSFTPIQP IMIGDAGRAL RLSQLLRERG LLVTAIRPPT VPAGSARLRV TLSAAHSEAD VQLLLEALEQ CYPLLDASES TEPVHA
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