Gene PSPTO_0495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0495 
SymbolbioF 
ID1182104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp542154 
End bp543344 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content63% 
IMG OID637391863 
Product8-amino-7-oxononanoate synthase 
Protein accessionNP_790344 
Protein GI28867725 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTCG ATCTCCGCAC GCGCCTTGAT GCCCGTCGCA CCGCACACCT CTATCGCCAG 
CGCCCACTGC TGCAAAGCCC GCAAGGCCCG CATGTCATTG TTGATGGTCA GCCATTGCTG
GCGTTCTGTA ACAACGACTA CATGGGCCTG GCCAACCATC CCGAAGTGAT CGCGGCCTGG
CAGGCAGGTG CCGAGCGCTG GGGCGTGGGC GGCGGGGCAT CGCATCTGGT GATCGGCCAC
AGCACGCCGC ACCATGAACT GGAAGAAGCG TTGGCCGAAT TGACCGGACG TCCGCGAGCG
CTGTTGTTCT CCAACGGTTA CATGGCCAAC CTCGGTGCGG TCACAGCCCT GGTCGGGCAG
GGCGACACGG TGCTGGAAGA CCGCCTCAAT CACGCTTCGC TGCTGGACGC CGGTTTGCTC
AGCGGCGCAC GCTTTTCCCG CTATCTGCAC AACGACGCCG GCAGTTTGAA CGCGCGTCTG
GAAAAAGCCG TGGGCGATAC GCTGGTGGTG ACAGACGGCG TGTTCAGCAT GGACGGCGAT
ATCGCTGACT TGCCCGCGCT GGCGCAGGCT GCCAAGGCCA AGGGCGCCTG GCTGATGGTC
GACGATGCCC ATGGCTTCGG GCCGCTGGGT GCCAATGGCG CAGGTATCGT CGAGCATTTC
GGCCTGAGCA TGGAGGATGT GCCGGTGTTG GTCGGCACCC TCGGCAAATC GTTCGGCACC
TCCGGGGCAT TCGTGGCGGG CAGCGAAGAA TTGATCGAAA CCCTGATCCA GTTCGCCCGT
CCGTACATCT ACACCACCAG CCAGCCACCT GCGCTGGCCT GCGCCACGCT GAAAAGCCTG
CAATTGTTGC GCAGCGAGCA TTGGCGTCGT GAGCATCTGG CGAGTTTGAT CGGCCAGTTT
CGTCGCGGCG CCGAGCAGCT CGGTCTGCAA TTGATGGACA GCTTCACGCC GATCCAGCCG
ATCATGATCG GCGATGCCGG GCGCGCATTG CGTCTGTCGC AGTTGCTCCG TGAGCGCGGC
TTGCTGGTGA CGGCGATTCG TCCGCCGACC GTGCCTGCGG GCAGCGCTCG TTTACGCGTG
ACGTTGTCTG CTGCGCACAG CGAGGCTGAC GTGCAGCTAT TATTGGAAGC TCTGGAGCAG
TGCTACCCGC TGCTGGATGC AAGTGAATCC ACGGAGCCCG TCCATGCGTG A
 
Protein sequence
MSFDLRTRLD ARRTAHLYRQ RPLLQSPQGP HVIVDGQPLL AFCNNDYMGL ANHPEVIAAW 
QAGAERWGVG GGASHLVIGH STPHHELEEA LAELTGRPRA LLFSNGYMAN LGAVTALVGQ
GDTVLEDRLN HASLLDAGLL SGARFSRYLH NDAGSLNARL EKAVGDTLVV TDGVFSMDGD
IADLPALAQA AKAKGAWLMV DDAHGFGPLG ANGAGIVEHF GLSMEDVPVL VGTLGKSFGT
SGAFVAGSEE LIETLIQFAR PYIYTTSQPP ALACATLKSL QLLRSEHWRR EHLASLIGQF
RRGAEQLGLQ LMDSFTPIQP IMIGDAGRAL RLSQLLRERG LLVTAIRPPT VPAGSARLRV
TLSAAHSEAD VQLLLEALEQ CYPLLDASES TEPVHA