Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0414 |
Symbol | mutM |
ID | 1182023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 461218 |
End bp | 462030 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391782 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | NP_790263 |
Protein GI | 28867644 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAT TACCAGAAGT CGAAACCACC CGCCGTGGCA TTGCGCCCCA CCTCGAAGGC CAGCGCGTCA GCCGCGTGAT CGTGCGTGAT GGCCGTCTGC GCTGGCCCGT TCCCGAGGAC CTGGACATCC GTCTTTCCGG GCAGCGCATC GTTCAGGTGA GTCGCCGCGC CAAGTACCTG CTGATTCAGG CCGAAGTGGG CACGTTGATC AGCCATTTGG GCATGTCGGG CAATCTGCGT CTCGTCGAGG CGGGGCTTGC GGCGCTCAAA CACGAGCACG TCGATATCGA GCTGGAATCC GGGCTGGCGC TGCGTTACAC CGACCCGCGT CGTTTCGGGG CGATGCTTTG GAGTCATGAT CCGCATAATC ACGAATTGTT GATCCGTCTT GGTCCCGAGC CGCTGACCGA TCTGTTCGAC GGCGAGCGTC TTTACGAGCG CTCGCGCGGC AAGTCGATTG CCGTAAAGCC GTTCATCATG GACAACGCCG TGGTGGTGGG CGTGGGCAAT ATCTACGCGA CAGAAGCGCT GTTTGCGGCG GGCATCGACC CTCGGCGCGA AGCCAGGGGG ATTTCCAGGG CGCGTTACCT GAAGCTGGCC ATCGAGATCA AACGCATTTT GGCGTATGCC ATTGAGCGCG GTGGCACGAC GTTGCGCGAC TTCATCGGCG GCGATGGCAA GCCCGGCTAT TTTCAGCAGG AATTGTTTGC CTATGGGCGC GGCGGTCAGC CTTGCAAGGT CTGTGGCACA ACGTTGCGCG AGATCAAGTT GGGCCAGCGC GCCAGCGTTT ACTGTCCCAA GTGCCAGCGC TGA
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Protein sequence | MPELPEVETT RRGIAPHLEG QRVSRVIVRD GRLRWPVPED LDIRLSGQRI VQVSRRAKYL LIQAEVGTLI SHLGMSGNLR LVEAGLAALK HEHVDIELES GLALRYTDPR RFGAMLWSHD PHNHELLIRL GPEPLTDLFD GERLYERSRG KSIAVKPFIM DNAVVVGVGN IYATEALFAA GIDPRREARG ISRARYLKLA IEIKRILAYA IERGGTTLRD FIGGDGKPGY FQQELFAYGR GGQPCKVCGT TLREIKLGQR ASVYCPKCQR
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