Gene PSPTO_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0414 
SymbolmutM 
ID1182023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp461218 
End bp462030 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID637391782 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionNP_790263 
Protein GI28867644 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT TACCAGAAGT CGAAACCACC CGCCGTGGCA TTGCGCCCCA CCTCGAAGGC 
CAGCGCGTCA GCCGCGTGAT CGTGCGTGAT GGCCGTCTGC GCTGGCCCGT TCCCGAGGAC
CTGGACATCC GTCTTTCCGG GCAGCGCATC GTTCAGGTGA GTCGCCGCGC CAAGTACCTG
CTGATTCAGG CCGAAGTGGG CACGTTGATC AGCCATTTGG GCATGTCGGG CAATCTGCGT
CTCGTCGAGG CGGGGCTTGC GGCGCTCAAA CACGAGCACG TCGATATCGA GCTGGAATCC
GGGCTGGCGC TGCGTTACAC CGACCCGCGT CGTTTCGGGG CGATGCTTTG GAGTCATGAT
CCGCATAATC ACGAATTGTT GATCCGTCTT GGTCCCGAGC CGCTGACCGA TCTGTTCGAC
GGCGAGCGTC TTTACGAGCG CTCGCGCGGC AAGTCGATTG CCGTAAAGCC GTTCATCATG
GACAACGCCG TGGTGGTGGG CGTGGGCAAT ATCTACGCGA CAGAAGCGCT GTTTGCGGCG
GGCATCGACC CTCGGCGCGA AGCCAGGGGG ATTTCCAGGG CGCGTTACCT GAAGCTGGCC
ATCGAGATCA AACGCATTTT GGCGTATGCC ATTGAGCGCG GTGGCACGAC GTTGCGCGAC
TTCATCGGCG GCGATGGCAA GCCCGGCTAT TTTCAGCAGG AATTGTTTGC CTATGGGCGC
GGCGGTCAGC CTTGCAAGGT CTGTGGCACA ACGTTGCGCG AGATCAAGTT GGGCCAGCGC
GCCAGCGTTT ACTGTCCCAA GTGCCAGCGC TGA
 
Protein sequence
MPELPEVETT RRGIAPHLEG QRVSRVIVRD GRLRWPVPED LDIRLSGQRI VQVSRRAKYL 
LIQAEVGTLI SHLGMSGNLR LVEAGLAALK HEHVDIELES GLALRYTDPR RFGAMLWSHD
PHNHELLIRL GPEPLTDLFD GERLYERSRG KSIAVKPFIM DNAVVVGVGN IYATEALFAA
GIDPRREARG ISRARYLKLA IEIKRILAYA IERGGTTLRD FIGGDGKPGY FQQELFAYGR
GGQPCKVCGT TLREIKLGQR ASVYCPKCQR