| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0378 |
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| Symbol | |
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| ID | 1181987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 418542 |
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| End bp | 419216 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391746 |
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| Product | DNA-binding heavy metal response regulator |
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| Protein accession | NP_790227 |
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| Protein GI | 28867608 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATCC TTGTCGTCGA GGACGAGCCG AAAACTGCCG AGTACATGCA TCAGGGTCTG
ACCGAGAGTG GCTATGTCGT CGATATCGCC GCCACCGGGC TCGATGGGCT CTACCTCGCG
CAGCATCAGG CTTACGATGT GGTGATACTG GACGTGAACC TGCCGGAAAT GGACGGCTGG
GAAGTGCTGA GCCGCCTGAG AAAAACCGTC AATACGCGCA TCATGATGGT CACGGCACGG
GGGCGTCTGG AAGAAAAGGT CAAAGGCCTG GAAATGGGCG CAGACGACTA TTTGGTCAAG
CCGTTTGAAT TTCCCGAGCT GCTGGCGCGG GTTCGCACCC TCATGCGCCG CAGCGAGCAG
ACCACCACCG CCAAAGTGTT GCAGGTCGGC GACCTGGAGC TCGATCAGGG TCGGCACCGG
GCGTTTCGCG GCAAGCAGCG TATTGATCTG ACCACCAAGG AGTTCGCGCT GCTGCACCTG
TTGATGCGCC ACAGCGGCGA GGTCATGTCG CGCACCCAGA TTATCTCGTT GGTATGGGAC
ATGAACTTCG ATTGCGACAC CAACGTGGTG GAAGTGTCGA TCCGCCGCTT GCGGGCGAAG
ATCGATGATC CGTTCGAGAC CAAGCTGATT CACACCCTGC GCGGCGTGGG CTATGTGCTG
GAAGTGCGCG AATGA
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| Protein sequence | MRILVVEDEP KTAEYMHQGL TESGYVVDIA ATGLDGLYLA QHQAYDVVIL DVNLPEMDGW
EVLSRLRKTV NTRIMMVTAR GRLEEKVKGL EMGADDYLVK PFEFPELLAR VRTLMRRSEQ
TTTAKVLQVG DLELDQGRHR AFRGKQRIDL TTKEFALLHL LMRHSGEVMS RTQIISLVWD
MNFDCDTNVV EVSIRRLRAK IDDPFETKLI HTLRGVGYVL EVRE
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