Gene PSPTO_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0377 
Symbol 
ID1181986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp417062 
End bp418288 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content65% 
IMG OID637391745 
Productmetal ion efflux outer membrane protein, putative 
Protein accessionNP_790226 
Protein GI28867607 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTCG GCGCATTTTG CCTGTTGCTG TTACCGCTTG TTGCCCCCGG TGTGGCAAGT 
GCCCAGGGCA TCAGCCTGCC GCAGGCACTG GAAGCGGCCT TTGCCCACAA CCCTGAGCTT
GCAGCCGCGC AGTGGGAAAT CGGTGTTGCA GAGGGTGATC GCCAGCAGGC CGGACTGATC
CCCAACCCGG TGCTGTCGTG GGAAGTGGAA GACACCCGCC GCGACACCAG CACCACCACC
GTGATGCTCA GCCAGGCGCT GGAACTGGGC GGCAAACGCG GTGCGCGTAT CGAAGCGGCC
GGCAAGGGTC AGGACGCTGC CAGACTGGAG CTTGAACAGC GTGGCAACGA ACTGCGCGCC
GACGTGGTTC AGGCGTTTTA TGCCGCAGCG CGGGCGCAGG CAGGTCTGGA GCTGGCGCGT
CAGTCCAGGG CACTGGCCGA GCGCGGCCTG CATGTCGCCG AAGGACGTGT GCGGGCGGGC
AAGGTCTCGC CGGTCGAAGC CACCCGCGCA CAAGTGCAGC TGGCAGAAAC CGACTTGCTG
GTACGCCGTG CCGAAACCCT GAAAATCAAC AGCAACCGTG AACTGGCACG CGCCACCGGC
TCGCCGACCG CCTCTTTCGA GCGCCTGGAT TACACCGACC TGTCGCCGGG CAAATCGCCA
TCGAGTGCAA GGATGATGAC CGCCCTCAAT CAGTCCGCCG AGCTGCGCCT GGCCCAGACC
CGGATCGAAC AGCGCGAAGC CGCACTCGGC TCGGAACGCG CCAAGCGCAT TCCCGACCTG
ACCGTCAGCG TCGGCAGCCA GTACAGCCGC GAAGAGCGCG AGCGGGTCAA CGTTGTGGGG
CTGTCGATGC CGCTGCCGTT GTTCGATCGC AATCAGGGCA ATGTGCTCGC CGCCTCACGC
CGTGCCGACC AGTCCCGTGA CCTGCGCAAT GCCGTCGAAC TCAAGCTGCG CACCCAGACG
CAATCAGCTC TCGATCAGTG GAGCACCGCG GCACAGGAAG TCGAGTCATT CAACAAGGTC
ATCCTGCCTG CCGCGCAAAG CGCCGTTGAC ACCGCAACCC GTGGTTTCGA GATGGGCAAG
TTCGGCTTCC TCGAAGTGCT GGATGCGCAA CGCACATTGA TTTCGGCCCG TAGCCAGTAC
CTGGAGTCAC TGGCGACGGC CACCGAAGCG CGGGTCGCCA TCGAGCGTAT CCACGGTGAT
CTCAACCGGT TCAGCTTCAC CCCCTGA
 
Protein sequence
MRVGAFCLLL LPLVAPGVAS AQGISLPQAL EAAFAHNPEL AAAQWEIGVA EGDRQQAGLI 
PNPVLSWEVE DTRRDTSTTT VMLSQALELG GKRGARIEAA GKGQDAARLE LEQRGNELRA
DVVQAFYAAA RAQAGLELAR QSRALAERGL HVAEGRVRAG KVSPVEATRA QVQLAETDLL
VRRAETLKIN SNRELARATG SPTASFERLD YTDLSPGKSP SSARMMTALN QSAELRLAQT
RIEQREAALG SERAKRIPDL TVSVGSQYSR EERERVNVVG LSMPLPLFDR NQGNVLAASR
RADQSRDLRN AVELKLRTQT QSALDQWSTA AQEVESFNKV ILPAAQSAVD TATRGFEMGK
FGFLEVLDAQ RTLISARSQY LESLATATEA RVAIERIHGD LNRFSFTP