| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0375 |
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| Symbol | |
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| ID | 1181984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 412540 |
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| End bp | 415701 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391743 |
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| Product | cation efflux family protein |
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| Protein accession | NP_790224 |
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| Protein GI | 28867605 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAC GGTTGATTCA ATTCGCGATT GAACAGCGCA TCGTCGTGAT GCTCGCTGTG
TTGCTCATGG CTGGGCTGGG CATTGCCAGT TACCAGAAAC TGCCCATCGA TGCCGTCCCC
GACATCACCA ACGTTCAGGT GCAGATCAAC ACCTCCGCGC CCGGCTTCTC ACCGCTGGAG
ACCGAGCAGC GGGTTACCTT CGCCATCGAA ACCAACATGG CCGGCCTGCC TGGCCTGCAA
CAGACCCGCT CGCTGTCGCG CTCGGGCCTG TCCCAGGTCA CGGTGATTTT CGAAGACGGC
ACGGACTTGT TCTTTGCTCG CCAGCTGGTG GGCGAGCGCC TGCAGATTGC CAAGGACCAG
TTGCCCGAAG GCGTCGATGC CATGATGGGG CCGATTTCCA CCGGCCTCGG CGAGATTTTT
CTGTGGACGG TCGAAGCCCG CGACGGCGCG CTGAAAGAAG ACGGCACGCC TTACACGCCG
ACGGACCTGC GAGTGATCCA GGACTGGATT ATCAAGCCGC AACTGCGCAA CGTGCCGGGC
GTGGCCGAGA TCAACACCAT CGGCGGTTTC GCCAAGCAAT ACCAGATAGC CCCCGACCCG
AAAAAACTCG CGGCCTACAA GCTGACCCTA AACGACCTGG TGGCCGCACT GGAGCGCAAC
AACGCCAACG TTGGCGCGGG TTACATCGAG CGCGGCGGCG AGCAACTGTT GATCCGCGCA
CCGGGCCAGC TCGGCACGGT GGACGACATC GCCAACATCG TCATCGCCAA TGTGCAGGGC
ACGCCGATCA GAATCAGCAG CGTGGCCGAG GTCGGCATCG GCAAGGAAAT GCGCTCCGGC
GCCGCGACTG AAAACGGTCG GGAAGTGGTG CTCGGCACGG TGTTCATGCT GATCGGTGAA
AACAGCCGGA CCGTCTCGCA GGCCGTGGCG GCCAAGCTTG CCGACATCAA CCGCACACTG
CCCGAAGGCG TCGAGGCGGT CACGGTGTAT GACCGCACCA ACCTGGTCGA AAAGGCCATC
GCGACGGTGA AAAAGAACCT GATCGAAGGC GCGATTCTGG TCATCGTGAT TCTGTTTCTG
TTCCTGGGCA ACATCCGCGC CGCACTGATC ACCGCCATGG TCATTCCACT GGCCATGCTC
TTCACCTTCA CCGGCATGTT CACCAACAAG GTCAGCGCCA ACCTGATGAG CCTGGGCGCG
CTGGACTTCG GCATCATTGT CGATGGCGCG GTGGTGATCG TCGAAAACGC CATCCGCAGG
CTGGCACATG CCCAAAAGAA ATACGGCCGC ATGCTGACCC GCAGCGAGCG CTTCCACGAA
GTGTTCGCCG CCGCCCGAGA AGCCCGTCGG CCGCTGATAT TCGGCCAGTT GATCATCATG
GTCGTGTACC TGCCGATCTT TGCCCTCACC GGCGTGGAAG GCAAAATGTT CCACCCGATG
GCCTTCACCG TGGTCATCGC CCTGCTCGGC GCCATGATCC TCTCGGTGAC CTTCGTGCCG
GCCGCCATCG CCATGTTCGT CACCGGCAAG GTCAAGGAAG AAGAAGGCTT TGTGATGCGC
ACCGCTCGCC AGCGCTATGC GCCGATCCTG AGCTGGGTGC TGAGCCATCG CGCCATCGCC
TTCGGCATGG CCTTCGTGCT GATCGTGCTG TCCGGCTTCA CTGCCAGCCG CATGGGCAGC
GAGTTCATCC CAAGCCTCAG CGAAGGCGAC TTTGCCTTGC AGGCGCTGCG CGTACCCGGT
ACCAGCCTGA GCCAGTCGGT GGACATGCAG CAGCGTCTGG AAAAAGCCAT CATCGAAAAA
GTGCCGGAAG TGCAGCGCGT CTTCGCCCGT ACCGGCACCG CCGAGATCGC CGCCGACCCG
ATGCCGCCCA ACATTTCCGA CAGCTACGTG ATGCTCAAGC CGCAAAGCGA ATGGCCGGAC
CCGGACAAAT CCCGCGAAAC GCTGATCGCC GACCTGCAAA AGGCCGCCGC CAGTGTGCCG
GGCAGCAACT ACGAACTGTC CCAGCCGATC CAGTTGCGCT TCAACGAACT GGTTTCCGGG
GTGCGCAGTG ACGTGGCGGT GAAAGTGTTC GGCGACGACA TGAACGTGCT CAACCAGACC
GCCGCCAAAA TCGCCGCCAC GCTGCAAAAA GTGCCGGGCG CCTCAGAAGT CAAAGTCGAG
CAGACCACCG GCCTGCCGGT ACTGACCATC AACATCGACC GCGACAAGGC TGCGCGTTAC
GGCCTCAACG TGGCCGACGT GCAGGACGCC ATCGCCATTG CGCTGGGCGG TCGTCAGGCG
GGCACCTTGT ATGAAGGTGA TCGGCGTTTC GACATGGTGG TGCGCCTGTC CGAGCAACTG
CGTACCGACG TGGACGGGCT TTCCAGCCTG CTCATTCCGG TGCCTGCGAA CGCGAGCAGC
CAGCAGATCA GCTTCATCGC CCTGTCCCAG GTCGCCAGCC TTGATCTGGT ATTAGGCCCG
AACCAGATCA GCCGCGAGAA CGGCAAGCGC GTGGTGATCG TCAGCGCCAA CGTGCGCGGT
CGCGACCTCG GCTCGTTTGT CGAAGAAGCG GGCACCACCA TCGACAGCGG CGTGCAGATC
CCGGCGGGCT ACTGGACCAA TTGGGGCGGC CAGTTCGAGC AACTGCAATC GGCCGCCAAA
CGCCTGCAAA TCGTCGTGCC GGTGGCATTG CTGCTGGTCC TCGCACTGTT GTTCATGATG
TTCAACAACC TCAAGGACGG CCTGCTGGTG TTCACCGGCA TACCGTTCGC CCTCACCGGC
GGCGTCATGG CCCTGTGGCT GCGCGACATT CCCCTGTCGA TCTCCGCAGG CGTGGGCTTC
ATCGCCCTGT CGGGTGTGGC CGTGCTGAAC GGCCTGGTGA TGATCTCTTT CATCCGCAGC
CTGCGCGAAG AAGGCCGCTC GTTGCACGAC GCCATCAACG AAGGCGCCCT CACCCGCCTG
CGCCCGGTGC TGATGACCGC CCTCGTCGCC TCCCTGGGCT TCATCCCCAT GGCCCTTGCC
ACCGGAACTG GCGCGGAAGT GCAGCGGCCA CTGGCAACGG TGGTGATTGG CGGGATTCTG
TCGTCTACGG CGCTGACGTT GCTGGTGCTG CCGGCGTTGT ATCAGTGGGC GCATCGGCGC
GAGGAGGAGC AGGAAGAGGA TGAGGTCAAG GCGCTGAAAT AG
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| Protein sequence | MFERLIQFAI EQRIVVMLAV LLMAGLGIAS YQKLPIDAVP DITNVQVQIN TSAPGFSPLE
TEQRVTFAIE TNMAGLPGLQ QTRSLSRSGL SQVTVIFEDG TDLFFARQLV GERLQIAKDQ
LPEGVDAMMG PISTGLGEIF LWTVEARDGA LKEDGTPYTP TDLRVIQDWI IKPQLRNVPG
VAEINTIGGF AKQYQIAPDP KKLAAYKLTL NDLVAALERN NANVGAGYIE RGGEQLLIRA
PGQLGTVDDI ANIVIANVQG TPIRISSVAE VGIGKEMRSG AATENGREVV LGTVFMLIGE
NSRTVSQAVA AKLADINRTL PEGVEAVTVY DRTNLVEKAI ATVKKNLIEG AILVIVILFL
FLGNIRAALI TAMVIPLAML FTFTGMFTNK VSANLMSLGA LDFGIIVDGA VVIVENAIRR
LAHAQKKYGR MLTRSERFHE VFAAAREARR PLIFGQLIIM VVYLPIFALT GVEGKMFHPM
AFTVVIALLG AMILSVTFVP AAIAMFVTGK VKEEEGFVMR TARQRYAPIL SWVLSHRAIA
FGMAFVLIVL SGFTASRMGS EFIPSLSEGD FALQALRVPG TSLSQSVDMQ QRLEKAIIEK
VPEVQRVFAR TGTAEIAADP MPPNISDSYV MLKPQSEWPD PDKSRETLIA DLQKAAASVP
GSNYELSQPI QLRFNELVSG VRSDVAVKVF GDDMNVLNQT AAKIAATLQK VPGASEVKVE
QTTGLPVLTI NIDRDKAARY GLNVADVQDA IAIALGGRQA GTLYEGDRRF DMVVRLSEQL
RTDVDGLSSL LIPVPANASS QQISFIALSQ VASLDLVLGP NQISRENGKR VVIVSANVRG
RDLGSFVEEA GTTIDSGVQI PAGYWTNWGG QFEQLQSAAK RLQIVVPVAL LLVLALLFMM
FNNLKDGLLV FTGIPFALTG GVMALWLRDI PLSISAGVGF IALSGVAVLN GLVMISFIRS
LREEGRSLHD AINEGALTRL RPVLMTALVA SLGFIPMALA TGTGAEVQRP LATVVIGGIL
SSTALTLLVL PALYQWAHRR EEEQEEDEVK ALK
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