| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0325 |
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| Symbol | gshA |
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| ID | 1181934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 354040 |
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| End bp | 355629 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391694 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | NP_790175 |
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| Protein GI | 28867556 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGAAC TTTTAAACCG TCGTCTTGCT TTGCTCGGCG AGCGCAACAA CCTCTCTTTG
CTGGAGCAGT GCCTGCACGG TATCGAGCGT GAGTGCCTGC GTGTCACGCC ACAGGCAGAG
CTGGCCCGCA CGCCCCATCC GCAAGCTCTG GGTGCCGCAC TGACCAACGG CCTTGTCACG
ACCGATTATT CCGAATCGCT GCTGGAGTTC ATTACCCCGG CGCTGAAGAA CCCGGTCGAT
ACCCTCGACA GCCTGGACAA GATCCATCGC TTTGCCTACA GCAAGCTGGA CAACGAGCTG
CTCTGGAGCC CGTCGATGCC TTGCCCGTTG CCGGACGAGG AGCACATCCC GATTGCGTAT
TACGGCACGT CGAACATCGG CAAGCTGAAA TACGTCTATC GCAAAGGGCT GGCGCTGCGT
TATGGCAAGA CCATGCAGTG CATTGCCGGT ATCCACTACA ATTTTTCGCT GCCGGAAGAC
GCCTGGGCGT TGCTCAAGCA GACCGAAGAC TTTGCCGGCG ATGCGCGCGA CTACCAGTCG
CACTCCTACA TCGCGCTGAT CCGTAACTTT CGCCGCTACA GCTGGCTGCT GATGTACCTG
TTTGGGGCAT CGCCCGCACT GGACGCAGGT TTCCTGCGCG GTCGCGAGCA CCAACTGGAG
CAGTTCGACG CTGATACCCT GTACCTGCCA TACGCCACCA GCCTGCGCAT GAGCGATCTG
GGTTACCAGA GCGATGCCCA GGCCGATCTG ACGCCGTGCT ACAACGATCT GGTCAGCTAC
ACCGACAGCC TGCGCAAGGC CGTGGCCACG CCGTACAAGC CCTACGTCGA TATCGGCACG
CACGACCAGA ACGGCGAATG GGTTCAGCTG AACACCAATG TGTTGCAGAT TGAGAACGAG
TACTACTCCA ACATCCGCCC CAAGCGTGTG ACCTATAGTG GCGAACGCCC TATCCAGGCG
CTGGTGGCCC GTGGGGTGCA GTATGTCGAA GTCCGCTGCC TGGACATCAA CCCGTTTCTG
CCGACCGGCA TCAGCCTGGA GCAGTCGCGC TTCATCGACG CATTCGTGCT GTATTGCGCA
CTTGAGGAGA GCCAGCAACT GGCTGGTCAT GAGTGTTCCA ACGCCAGCTC GAACTTTCTT
GCAGTGGTCA AGGAAGGGCG TCGTCCGGGC CTGAACCTGC AACGCGATGA CTCGCCTGTC
GAGCTCAAGG CCTGGGCCAC CGATTTGCTG GAAAAAATCA CGCCGATTGC CCGACTGCTC
GATCAGGCGC AGGGCACCGA TGAGCACATC AAGTCGATTG CCGTGCAACA GGCCAAGATC
GACGACACCT CCCTGACACC TTCTGCCCAG GTGCTGGCCA GCATGAGAGC GCATGGCGAA
GGCTTCACGG CGTTTTCCCT GCGCCAGAGC CAGGTCCACG CCGAATACTT CCGCACCCAT
CCGCTGAGTG CCGCAGAGCA GGCGCATTTC GAAGACCTGG CCAAAACCTC GCTGGAGGAA
CAGGCCGAAC TGGAGGCGAC AGAAGAAGTG GTGGATTTCG ACACGTTTGT CGGGTCGTAT
CAGGCGAGCA TTCTGTCGAT CAGTAACTGA
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| Protein sequence | MSELLNRRLA LLGERNNLSL LEQCLHGIER ECLRVTPQAE LARTPHPQAL GAALTNGLVT
TDYSESLLEF ITPALKNPVD TLDSLDKIHR FAYSKLDNEL LWSPSMPCPL PDEEHIPIAY
YGTSNIGKLK YVYRKGLALR YGKTMQCIAG IHYNFSLPED AWALLKQTED FAGDARDYQS
HSYIALIRNF RRYSWLLMYL FGASPALDAG FLRGREHQLE QFDADTLYLP YATSLRMSDL
GYQSDAQADL TPCYNDLVSY TDSLRKAVAT PYKPYVDIGT HDQNGEWVQL NTNVLQIENE
YYSNIRPKRV TYSGERPIQA LVARGVQYVE VRCLDINPFL PTGISLEQSR FIDAFVLYCA
LEESQQLAGH ECSNASSNFL AVVKEGRRPG LNLQRDDSPV ELKAWATDLL EKITPIARLL
DQAQGTDEHI KSIAVQQAKI DDTSLTPSAQ VLASMRAHGE GFTAFSLRQS QVHAEYFRTH
PLSAAEQAHF EDLAKTSLEE QAELEATEEV VDFDTFVGSY QASILSISN
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