| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0301 |
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| Symbol | gabT-2 |
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| ID | 1181910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 327391 |
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| End bp | 328671 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391670 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | NP_790151 |
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| Protein GI | 28867532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA CCAACGAATC CCTGATGCAA CGCCGCCATG CTGCCGTCCC GCGTGGCGTT
GGTCAGATCC ACCCTATCTT CGCTGCTTCG GCGAAGAACG CCACCGTTAC CGACGTGGAA
GGTCGTGAAT TCATCGACTT CGCCGGCGGT ATTGCGGTGC TGAACACCGG TCACCTGCAC
CCGAAGATCG TCGCCGCCGT GCAAGAGCAG CTCACCAAGC TGACCCATAC CTGTTTCCAG
GTATTGGCGT ACGAGCCTTA TGTAGAGCTG TGCGAAAAGA TCAACGCCAA AGTGCCAGGT
GATTTCGACA AGAAAACCCT GCTGGTCACT ACCGGTTCCG AAGCGGTGGA AAACGCCGTG
AAGATCGCTC GTGCTGCCAC TGGCCGTGCA GGTGTGATCG CGTTCACCGG TGCTTACCAC
GGCCGCACCA TGATGACCCT GGGCCTGACC GGTAAGGTTG TGCCTTACTC GGCCGGCATG
GGCCTGATGC CGGGCGGTAT CTTCCGCGCG CTGTACCCGT GCGAGCTGCA TGGCGTGAGC
GTTGACGATT CCATCGCCAG CATCGAGCGC ATCTTCAAGA ACGACGCCGA GCCACGGGAC
ATCGCTGCGA TCATCATCGA GCCGGTGCAG GGCGAAGGTG GTTTCTACGT GGCGCCGAAG
GCCTTCATGC TGCGTCTGCG CGAGCTGTGC GACAAGCATG GCATCCTGCT GATCGCTGAC
GAAGTGCAGA CCGGCGCTGG CCGTACCGGT ACGTTCTTCG CCATGGAGCA GATGGGCGTT
GCTGCTGACC TGACCACATT CGCCAAGTCC ATCGCGGGCG GTTTCCCGTT GGCGGGCGTG
TGCGGCAAGG CTGAATACAT GGACGCCATT GCGCCCGGCG GTCTGGGCGG CACGTATGCC
GGTAGCCCGG TGGCCTGCGC GGCAGCCTTG GCGGTGCTGG ATATCTTTGA AGAAGAACAC
CTGCTGGAGC GCTGCAAGAC CGTGGGCGAG CGTCTGGTGA CGGCGCTCAA AGGCATGCAG
GCCAAGTACC CGGTGATCGG TGAAGTGCGT GCGCTGGGCG CGATGATCGC TGTCGAGCTG
TTTGAAGACG GCGACTCGCA CAAGCCTAAC GCCGCTGCAG TGGCTCAGGT TGTCGCCAAG
GCGCGTGACA AGGGGTTGAT CCTGCTGTCG TGCGGTACTT ACGGCAACGT GTTGCGCGTA
CTGGTACCGC TGACCGCCGA AGAGGAACTG CTGACCCGTG GTCTGGCAAT TCTCGACGAG
TGCTTCGCTG AAATAGCGTG A
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| Protein sequence | MSQTNESLMQ RRHAAVPRGV GQIHPIFAAS AKNATVTDVE GREFIDFAGG IAVLNTGHLH
PKIVAAVQEQ LTKLTHTCFQ VLAYEPYVEL CEKINAKVPG DFDKKTLLVT TGSEAVENAV
KIARAATGRA GVIAFTGAYH GRTMMTLGLT GKVVPYSAGM GLMPGGIFRA LYPCELHGVS
VDDSIASIER IFKNDAEPRD IAAIIIEPVQ GEGGFYVAPK AFMLRLRELC DKHGILLIAD
EVQTGAGRTG TFFAMEQMGV AADLTTFAKS IAGGFPLAGV CGKAEYMDAI APGGLGGTYA
GSPVACAAAL AVLDIFEEEH LLERCKTVGE RLVTALKGMQ AKYPVIGEVR ALGAMIAVEL
FEDGDSHKPN AAAVAQVVAK ARDKGLILLS CGTYGNVLRV LVPLTAEEEL LTRGLAILDE
CFAEIA
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