Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0243 |
Symbol | |
ID | 1181851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 263550 |
End bp | 264371 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637391612 |
Product | hypothetical protein |
Protein accession | NP_790094 |
Protein GI | 28867475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGCATT TTGATACGCA CGCTTTTCAG CGGAAAACTA AAGCGGTGTC TGGCTGGGCC GATACAAAGA GTGAATATAA AGCCATGGAT TGGCCTCTGC CGCGAGGACG CAGCATGATT GATACAAAAT CCATCACACA CCTCACCAGT AAAATCGCAC TAACGACTGT CGAGAAAAGC ATCTCCGCCA CGACCATAAA CTCTAGTCTA AAAGAACTAG ATTCTGCACC TGCCATTGAC GGCGCCACCT TCTCGACATT GTCCAGTCAG TTAAGTAGCA GCGCAGCACG AGCCCAAGCT CGTGACAGCA GTCTTGACTT AAAAAACCTG GGGGCCTTGG CAAAAAATAT TAGTGATAAA GTTGCAGGCA ACAGCTATTA CGCCAATAGA AAACTGCACG ACGCAGAGAT TCCGGATACG GACGACCCTG TATTGCTCGA AAGGGCCAGG CAAGCGACTT CGTTCAGCAA CGGGGCAGGA AAAAACCCAT TCGCGGGTTT ATCTCAGGAT CAACTGAGGT TGATTATTTA TGACGAGGGT GGCGACTTCA CAATAAACGA AAGAAATGCC GCGTACTCCG AAAACTACTC TCAAGAACAA GTATGGAAAA GGGCCATATG CCAAAGGTAT ACCGACGAAT ACAACGAGAC CGGCAAAAGC ACTCAAACGC TGGTGATGCT TCTCGCCCAC TACAACCAGC TGCCCCCCAT AGAAAAAGCA CAATACCCGG CCAATTACGC CGCCAACATT ACTTCGGGGG ACAGTTCAGC CCTGGATATT TTCAACACAC TGAAAAGTCA GTCACACACT CAGGAGGCTT GA
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Protein sequence | MSHFDTHAFQ RKTKAVSGWA DTKSEYKAMD WPLPRGRSMI DTKSITHLTS KIALTTVEKS ISATTINSSL KELDSAPAID GATFSTLSSQ LSSSAARAQA RDSSLDLKNL GALAKNISDK VAGNSYYANR KLHDAEIPDT DDPVLLERAR QATSFSNGAG KNPFAGLSQD QLRLIIYDEG GDFTINERNA AYSENYSQEQ VWKRAICQRY TDEYNETGKS TQTLVMLLAH YNQLPPIEKA QYPANYAANI TSGDSSALDI FNTLKSQSHT QEA
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