| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0234 |
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| Symbol | rimK |
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| ID | 1181842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 255243 |
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| End bp | 256148 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391603 |
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| Product | ribosomal protein S6 modification protein |
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| Protein accession | NP_790085 |
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| Protein GI | 28867466 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGATCG CTGTGCTTTC GCGTAATCCG CGTTTGTATT CCACACGTCG TCTGGTCGAA
GCGGGTATCG AGCGGGGCCA TGAGATGGTG GTGATCGACA CGCTGCGCGC CTATATGAAC
ATCGCCAGTC ATAAGCCGCA GATCCACTAT CGCGGCAAAC CGCTGGAGGG CTTCGATGCG
GTCATTCCAC GCATTGGCGC CTCGGTGACG TTCTATGGCT GTGCGGTGTT GCGCCAGTTT
GAAATGATGG GCGTGTTTCC GCTCAACGAA TCCGTCGCCA TTGCCCGCTC GCGGGACAAG
CTGCGCTCGC TGCAATTGCT GTCACGCCGG GGGATCGGCC TGCCGGTCAC CGGGTTTGCG
CATTCGCCGG ACGACATTCC CGACCTGATC CAGATGGTCA ACGGCGCGCC GCTGGTCATC
AAGGTGCTGG AAGGCACTCA GGGGATCGGC GTGGTGCTGT GCGAAACCGC CACGGCCGCT
GAGTCGGTGA TCGAAGCCTT CATGGGCCTC AAGCAGGACA TCATGGTTCA GGAGTACATC
AAGGAAGCCG GCGGCGCAGA CATTCGCTGT TTCGTGGTTG GGGACAAGGT AATCGCCTCG
ATGAAACGTC AGGCCAAACC GGGTGAGTTC CGCTCCAACC TGCACCGTGG CGGCAGCGCC
AGCCTGATCA AGATCACCCC CGAAGAGCGC ATGACCGCGT TGCGCGCAGC CAAGGTCATG
GGCCTGAGTG TCGCGGGCGT GGATATCCTG CGCTCCAATC ACGGCCCGTT GGTGATGGAG
GTGAACTCCT CACCCGGCCT GGAAGGTATT GAAGTGACCA CCAGCAAGGA TGTCGCTGGA
ATGATCATTG AGTACCTGGA AAAGAACAGC GGTCCGCACA TGACCCGCAC CAAGGGAAAA
GGCTGA
|
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| Protein sequence | MKIAVLSRNP RLYSTRRLVE AGIERGHEMV VIDTLRAYMN IASHKPQIHY RGKPLEGFDA
VIPRIGASVT FYGCAVLRQF EMMGVFPLNE SVAIARSRDK LRSLQLLSRR GIGLPVTGFA
HSPDDIPDLI QMVNGAPLVI KVLEGTQGIG VVLCETATAA ESVIEAFMGL KQDIMVQEYI
KEAGGADIRC FVVGDKVIAS MKRQAKPGEF RSNLHRGGSA SLIKITPEER MTALRAAKVM
GLSVAGVDIL RSNHGPLVME VNSSPGLEGI EVTTSKDVAG MIIEYLEKNS GPHMTRTKGK
G
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