| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0187 |
|---|
| Symbol | |
|---|
| ID | 1181795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 210455 |
|---|
| End bp | 211225 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637391564 |
|---|
| Product | hdtS protein |
|---|
| Protein accession | NP_790046 |
|---|
| Protein GI | 28867427 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA TGCAGGCAAT CAGGACCTTC ATCTTTTACC TGTTGCTGGG CACCAGCTCG
CTGCTGTGGT GCACCTTGAG CTTTTTCATT GCGCCGTTTC TGCCGTTCAA GGCCCGCTAT
CGCTTCATCA ATGTCTACTG GTGCCGTTGC GCACTGTGGC TGACCCGGGT GTTCCTCAAC
ATCAAGGTCG AAGTAAGCGG CGCAGACAAC GTTCCGAAAA CGCCGTGCGT GATCATCTCC
AACCATCAAA GCACGTGGGA AACCTTCTTT CTGTCGGCGT ATTTCGAGCC ACTGAGCCAG
GTCCTCAAGC GTGAGTTGCT GTACGTGCCC TTCTTCGGCT GGGCGATGGC CATGCTGCGC
CCCATCGCCA TCGACCGTGA TAACCCGAAG GCTGCACTCA GGGAAATCGC CAAGAAGGGC
GACGAACTGC TCAAGGACGG CGTCTGGGTG CTGATCTTCC CGGAAGGCAC GCGTGTGCCT
TACGGCCAGG TTGGCAAGTT CTCGCGTGGC GGCACGGCAC TTGCGGTCAA CGCCGACCTT
CCGGTTCTGC CTATTGCTCA CAACGCAGGC AAATACTGGC CTCGCGATGG CTGGGGGAAG
AAGCCAGGCA CTATTCAGGT AGTCATCGGC GAACCGATGT ACGCCGAAGG CACCGGCCCC
CGCGCCATCG CAGCGTTGAA CGAGCGCGTT CAGACCTGGA ATGAGGATAC TCAACGCGCA
TTGGGCTCAC CGGTTGCACC GGCGACAAGC ACCGAAAAGG TCCCGGCGTG A
|
|---|
| Protein sequence | MSIMQAIRTF IFYLLLGTSS LLWCTLSFFI APFLPFKARY RFINVYWCRC ALWLTRVFLN
IKVEVSGADN VPKTPCVIIS NHQSTWETFF LSAYFEPLSQ VLKRELLYVP FFGWAMAMLR
PIAIDRDNPK AALREIAKKG DELLKDGVWV LIFPEGTRVP YGQVGKFSRG GTALAVNADL
PVLPIAHNAG KYWPRDGWGK KPGTIQVVIG EPMYAEGTGP RAIAALNERV QTWNEDTQRA
LGSPVAPATS TEKVPA
|
|---|
| |