Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0175 |
Symbol | |
ID | 1181783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 196084 |
End bp | 197268 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637391552 |
Product | DNA processing protein DprA, putative |
Protein accession | NP_790034 |
Protein GI | 28867415 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGTCAA CAGAGTTATC CACAGGTTTG CGCACCATTC CGGGTGCGCA ATGGATCAGG GACGATCTCA TGCCACTGTT CGAAAAAGAA CGCTCCTCGC CTGCCGAACT GGAAGCGCGT CTGCGTGTGC ATCGCTTACC CGAGGTGGGG CCGAAACGCT TTTTCAGGCT GATGGAAGCC TTCGGCTCTG CCTCTTCGGC ACTCAGCGCA CCGGCCAGCG CATGGCGTGC GCTGGGCCTG CCCGGTGCCT GCGCAGAGGC TCGGCGTGAC CCTTTGGTGC GTGATGGCGC CAGCGTTGCG CTGGCCTGGC TGGAGCGTCC GGGCCAGCAT TTACTGATGT GGGACGACCC TTGCTACCCC GCGTTGCTGG CGCAGATCGC CGATCCGCCG CCGCTGATTT TCATCGCCGG CGACCCTTCC ATTCTTGAGC GCCCGCAGTT GGGAATGGTC GGTAGCCGTC GCGCCTCCAA GCCCGGGCTG GACACCGCCA AGGCATTTGC ACGCAGTCTG GCCGGCGCCG GTTTTGTGGT CACCAGCGGT CTGGCGCGGG GCATCGACGG TGCTGCGCAT CAGGGCGCAC TGGATGTCGG TGGGCTTACA ATCGGCGTGC TTGGCACCGG GCTTGGAAAA CTTTATCCAC AGCAGCATCG CGCCCTCGCC ACTCAGATCG CGGCACAGGG TGGCGCGGTG ATTTCCGAGT TCCCGCTGGA CGCCGGACCG CAGCCCAGCA ACTTCCCGCG GCGCAACCGG ATCATCAGCG GCCTGTCGCT CGGCGTGCTG GTGGTCGAGG CCAGCGTTGC CAGCGGTTCG TTGATTACCG CACGCCTCGC CGCCGAGCAG GGACGAGAGG TTTATGCGAT ACCGGGCTCG ATTCACCATC CGGGCGCCAA AGGGTGTCAC CAGCTGATAA GGGACGGCGC GACGCTGGTC GAGACCGTCG ACCACATTCT GGAAGGCTTG CAGCACTGGA AGCGCGTCGC ACCCAGCGCC GACTCTTCAA ATACCGAACC TGCTCCCTGC GACCATCCAC TATTGGCCTT GTTGCACGCC GCGCCGCATA CCAGCGAGGG GCTGTCGGTC TCCAGTGGCT GGCCATTGCC GAAAGTATTG GCTGGCCTGA CCGAGCTGGA ACTGGACGGA CGCATAAGCT GTGAAGCGGG ACGATGGTTC GCCAGCGCGC CCTGA
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Protein sequence | MLSTELSTGL RTIPGAQWIR DDLMPLFEKE RSSPAELEAR LRVHRLPEVG PKRFFRLMEA FGSASSALSA PASAWRALGL PGACAEARRD PLVRDGASVA LAWLERPGQH LLMWDDPCYP ALLAQIADPP PLIFIAGDPS ILERPQLGMV GSRRASKPGL DTAKAFARSL AGAGFVVTSG LARGIDGAAH QGALDVGGLT IGVLGTGLGK LYPQQHRALA TQIAAQGGAV ISEFPLDAGP QPSNFPRRNR IISGLSLGVL VVEASVASGS LITARLAAEQ GREVYAIPGS IHHPGAKGCH QLIRDGATLV ETVDHILEGL QHWKRVAPSA DSSNTEPAPC DHPLLALLHA APHTSEGLSV SSGWPLPKVL AGLTELELDG RISCEAGRWF ASAP
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