| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0164 |
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| Symbol | |
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| ID | 1181772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 183857 |
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| End bp | 184807 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391541 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_790023 |
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| Protein GI | 28867404 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAG CTTTTGGCGA CATGTCCCTT GACCTGCTGC GTGCTTTTGA AGTCGCGGCC
CGCCTGCGCA GCTTTACTGC AGCGGCCATC GAACTGGGCA CGATTCAGCC TGCCGTCAGC
CAGCAGATCA AGCGCCTTGA AGAACAACTG GCCACCCGAC TGTTTGACCG CATCTATCGC
GGCATCGAGC TCACCGAAGC CGGTGAAATA CTGTTCAGCC ACGTACAGGC AGGCTTGCAG
TCCATCGACA GCGGGCTGAT AGCGATCACC GAACAGCAGC AACACGAGGT GCTTCAAGTC
GCCACCGACT TTGCCTTTGC CGCCTACTGG CTGATGCCGC GCCTGCACCG CTTTCACAAG
CTTAACCCCG ACGTGGACGT CAGCCTGGTG ACCAGCGAGC GTACCCACAG CATGCTGCGC
GCCGATATCG ACGTCACCGT GCTGTTCGGT GACGGGCGCT TCAAACAGGG CGAAAGCCGC
TGGCTGTTCA GCGAAGAAGT CTTCCCGGTA TGCAGCCCGC TGCTGATTGC CGACCGCCAG
ACACCACTGC CCAACGACGC CCTTCGCGAC TTCCCGCTGC TGCACCTGCG TGGCGACAGC
ATCAACAACT GGTTCGACTG GTCTGGCGTA TTCCGCGCCC TCGACATCCC CCAGGCCCCC
GCCCCCGGCC AGTTGCGCTT CGACAACTAC ACCCTGCTCA TCCAGGCCGC CATCGGCGGA
CAAGGCATCG CCATCGGCTG GAAACACCTG GTCGACGACC TCCTCGACCA AGGCCTGCTT
TGCCGCCCCA TCGCCGGCGC AGCCATTTCC GGACACGGCT ATTACGTGGT TTTGCCCCAG
CGCAAACGGC GGGTGCAGAT TGTCCAGCAG TTCATGGACT GGCTGGCGAG CGAGCAGGCG
TTGAGCGGGG TTTCGCTGGC GGGCAGGCCG TTGCCTTCGA TTGCGGTTTG A
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| Protein sequence | MFEAFGDMSL DLLRAFEVAA RLRSFTAAAI ELGTIQPAVS QQIKRLEEQL ATRLFDRIYR
GIELTEAGEI LFSHVQAGLQ SIDSGLIAIT EQQQHEVLQV ATDFAFAAYW LMPRLHRFHK
LNPDVDVSLV TSERTHSMLR ADIDVTVLFG DGRFKQGESR WLFSEEVFPV CSPLLIADRQ
TPLPNDALRD FPLLHLRGDS INNWFDWSGV FRALDIPQAP APGQLRFDNY TLLIQAAIGG
QGIAIGWKHL VDDLLDQGLL CRPIAGAAIS GHGYYVVLPQ RKRRVQIVQQ FMDWLASEQA
LSGVSLAGRP LPSIAV
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