Gene PSPTO_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0162 
Symbol 
ID1181770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp181714 
End bp182538 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID637391539 
Product3-oxoadipate enol-lactone hydrolase family protein 
Protein accessionNP_790021 
Protein GI28867402 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGATC TACTCATCGA CGGTAAGACC CTTCACTACG CTGACCAAGG CACCGGTCCG 
GTTGTCCTGC TGGGTCACAG TTACCTTTGG GACAAGGCGA TGTGGAGTGC GCAGATCGAC
ACGTTGGCCA GCCGGTATCG GGTGATTGTG CCGGACCTTT GGGGGCATGG GGATTCCAGC
GGTTTCCCGG AGGGCACCCG CAACCTCGAT GACCTGGCTC GCCATGCGCT GGCGCTTCTG
GATCATTTGA ATATCGAACG TTGCAGTATC GTCGGGTTGT CGGTGGGCGG TATGTGGGGT
GCCATTGCGG CACTGCTCGC GCCAGAGCGC ATCACCGGGC TGGTGCTCAT GGACACGTAT
CTGGGCAAGG AGACCGAGGC CAAGAAGGCC TATTACTTCT CGCTGCTCGA CAAGCTGGAA
GAGGCCGGTG CTTTTCCTGC GCCGCTGTTG GACATTGTGG TGCCGATCTT CTTCCGGCCT
GGTATTGACC CGCAGTCGCC GGTGTATCAG GCGTTTCGGT CGGCGTTGGC GGGCATGAAT
GCCGAGCAGT TGCGTCAGTC CGTCGTACCA CTGGGAAGAA TGATTTTTGA TCGTGATGAC
CGGCTTGGGT TGATCGAGCA ATTGAATGCC GACACCACGC TGGTGATGTG TGGCGATGCA
GACATCCCTC GCCCGCCTGA GGAGACTCGT GAGATGGCCG GCCTGATTGG CTGCCCTTAT
GTGCTGGTGC CCGAGGCGGG GCATATCGCC AATCTGGAAA ATCCCGCGTT CGTATCGGGT
GCGCTGATGA CGTTCCTGGC GCGGGTTAAC CAGAAGCAGG GTTGA
 
Protein sequence
MPDLLIDGKT LHYADQGTGP VVLLGHSYLW DKAMWSAQID TLASRYRVIV PDLWGHGDSS 
GFPEGTRNLD DLARHALALL DHLNIERCSI VGLSVGGMWG AIAALLAPER ITGLVLMDTY
LGKETEAKKA YYFSLLDKLE EAGAFPAPLL DIVVPIFFRP GIDPQSPVYQ AFRSALAGMN
AEQLRQSVVP LGRMIFDRDD RLGLIEQLNA DTTLVMCGDA DIPRPPEETR EMAGLIGCPY
VLVPEAGHIA NLENPAFVSG ALMTFLARVN QKQG