Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0162 |
Symbol | |
ID | 1181770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 181714 |
End bp | 182538 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637391539 |
Product | 3-oxoadipate enol-lactone hydrolase family protein |
Protein accession | NP_790021 |
Protein GI | 28867402 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGATC TACTCATCGA CGGTAAGACC CTTCACTACG CTGACCAAGG CACCGGTCCG GTTGTCCTGC TGGGTCACAG TTACCTTTGG GACAAGGCGA TGTGGAGTGC GCAGATCGAC ACGTTGGCCA GCCGGTATCG GGTGATTGTG CCGGACCTTT GGGGGCATGG GGATTCCAGC GGTTTCCCGG AGGGCACCCG CAACCTCGAT GACCTGGCTC GCCATGCGCT GGCGCTTCTG GATCATTTGA ATATCGAACG TTGCAGTATC GTCGGGTTGT CGGTGGGCGG TATGTGGGGT GCCATTGCGG CACTGCTCGC GCCAGAGCGC ATCACCGGGC TGGTGCTCAT GGACACGTAT CTGGGCAAGG AGACCGAGGC CAAGAAGGCC TATTACTTCT CGCTGCTCGA CAAGCTGGAA GAGGCCGGTG CTTTTCCTGC GCCGCTGTTG GACATTGTGG TGCCGATCTT CTTCCGGCCT GGTATTGACC CGCAGTCGCC GGTGTATCAG GCGTTTCGGT CGGCGTTGGC GGGCATGAAT GCCGAGCAGT TGCGTCAGTC CGTCGTACCA CTGGGAAGAA TGATTTTTGA TCGTGATGAC CGGCTTGGGT TGATCGAGCA ATTGAATGCC GACACCACGC TGGTGATGTG TGGCGATGCA GACATCCCTC GCCCGCCTGA GGAGACTCGT GAGATGGCCG GCCTGATTGG CTGCCCTTAT GTGCTGGTGC CCGAGGCGGG GCATATCGCC AATCTGGAAA ATCCCGCGTT CGTATCGGGT GCGCTGATGA CGTTCCTGGC GCGGGTTAAC CAGAAGCAGG GTTGA
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Protein sequence | MPDLLIDGKT LHYADQGTGP VVLLGHSYLW DKAMWSAQID TLASRYRVIV PDLWGHGDSS GFPEGTRNLD DLARHALALL DHLNIERCSI VGLSVGGMWG AIAALLAPER ITGLVLMDTY LGKETEAKKA YYFSLLDKLE EAGAFPAPLL DIVVPIFFRP GIDPQSPVYQ AFRSALAGMN AEQLRQSVVP LGRMIFDRDD RLGLIEQLNA DTTLVMCGDA DIPRPPEETR EMAGLIGCPY VLVPEAGHIA NLENPAFVSG ALMTFLARVN QKQG
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