| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0157 |
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| Symbol | trpI |
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| ID | 1181765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 177812 |
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| End bp | 178720 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391534 |
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| Product | trpBA operon transcriptional activator |
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| Protein accession | NP_790016 |
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| Protein GI | 28867397 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGCG ACCTCCCTCC TCTCAATGCT TTGCGTGCCT TTGAAAGCAC CGCCCGATTC
GGCAGCGTCA GTCAGGCCGC CGAGCAGCTG AGCGTGACCC ACGGTGCTGT CAGCCGTCAG
TTGAAAGTCC TGGAAGAACA CTTGGGCGTC AGCCTGTTCA GCAAGGACGG GCGTGGCCTG
AAACTCACAG ATGCGGGCAT TCGCTTGCGT GACGCCAGCG CCGACGCATT CGACCGGCTG
CGAAGCGTGT GCGCAGAACT GAGCAAAGGC AGCGTCGATG CGCCTTTCGT GCTCGGTTGT
TCCGGCAGCC TGCTGGCCCG TTGGTTTATC CCGCGCCTGA GCCGCTTGAA TGCGGAGTTA
CCGGACCTGC GTCTGCACCT GTCGGCAGGC GAAGGTGATC TTGACCCACG TCGGCCAGGG
CTGGATGCGT TGCTGGTATT TGCCGAGCCA CCCTGGCCTG CAGACATGCA GGTCTTCGAG
CTGGCCAGCG AACGAATCGG CCCGGTCCTG AGCCCGCGCT TTGCGCGATT CGAAAGCATG
CGCGATGCGC CCGCCAACGC CCTGCTTGAA GAATCCTTGT TGCAAACCAC GTCACGTCCG
CAAGCTTGGC CAAGCTGGGC ACAGCAGAAC GGAATCGATC CGGACGCGTT GCGCTACGGT
CAGGGTTTCG AGCATTTGTA TTATTTGCTG GAGGCGGCCG TGGCAGGCTT GGGCATCGCG
ATTGCGCCGG AACCGCTGGT CATCGATGAC CTGAAAGCCG GTCGCCTGGC TGCGCCGTGG
GGTTTCAGTG AAACCCCGGC ACAGCTGGCG TTGTGGGTAC CCAGAAGAGC GGCCGATGGA
CGAGCGCGGC AGCTTGCTCA GTGGTTGAAA AATGAGCTGA AGCGGTCTGG GGACCCGATC
AGAAACTGA
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| Protein sequence | MSRDLPPLNA LRAFESTARF GSVSQAAEQL SVTHGAVSRQ LKVLEEHLGV SLFSKDGRGL
KLTDAGIRLR DASADAFDRL RSVCAELSKG SVDAPFVLGC SGSLLARWFI PRLSRLNAEL
PDLRLHLSAG EGDLDPRRPG LDALLVFAEP PWPADMQVFE LASERIGPVL SPRFARFESM
RDAPANALLE ESLLQTTSRP QAWPSWAQQN GIDPDALRYG QGFEHLYYLL EAAVAGLGIA
IAPEPLVIDD LKAGRLAAPW GFSETPAQLA LWVPRRAADG RARQLAQWLK NELKRSGDPI
RN
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