Gene PSPTO_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0145 
Symbol 
ID1181753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp168837 
End bp169382 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID637391522 
Producthypothetical protein 
Protein accessionNP_790004 
Protein GI28867385 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCATTC GCAAGTTTCA GGACCACACC CCAGCCCTCG GCGAACGGGC CTTTATCGAT 
CATTCAGCGA TGGTTATCGG TGACGTCGAA ATCGGTGCCG ACAGCTCCAT CTGGCCGCTG
ACGGTCGTAC GCGGCGACAT GCACCGCATC CGCATCGGCG CGCGCACCAG CGTGCAGGAC
GGCAGCGTGC TGCACATCAC CCACGCCGGC CCCTTCAACC CCGACGGCTT CCCGCTGCTG
ATCGGCGACG AGGTGACCAT CGGCCATAAA TCGATGCTAC ATGGCTGCAC CATTGGCAAC
CGCATCCTGG TCGGCATGGG CACCACCATC ATGGATGGCG CAGTGGTGGA AGATGAAGTG
ATCATCGGCG CAGGCAGCCT GGTGCCACCG GGCAAAGTGC TGGAAAGCGG CTTTTTGTAT
GTCGGCAGGC CAGTCAAACA GGCGCGTGCA TTGACCGAAA AGGAAATCGC CTTTTTTCCG
TACAGCGCCA CCAACTACGT GAAGCTCAAG GACCAGCATC TGGCTGAGGG GTTTGATAAG
CCGTAA
 
Protein sequence
MAIRKFQDHT PALGERAFID HSAMVIGDVE IGADSSIWPL TVVRGDMHRI RIGARTSVQD 
GSVLHITHAG PFNPDGFPLL IGDEVTIGHK SMLHGCTIGN RILVGMGTTI MDGAVVEDEV
IIGAGSLVPP GKVLESGFLY VGRPVKQARA LTEKEIAFFP YSATNYVKLK DQHLAEGFDK
P