| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0127 |
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| Symbol | algR |
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| ID | 1181735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 151591 |
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| End bp | 152337 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637391504 |
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| Product | alginate biosynthesis regulatory protein AlgR |
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| Protein accession | NP_789986 |
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| Protein GI | 28867367 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGTCC TGATCGTTGA TGACGAACCC CTGGCCCGCG AGCGATTGAG CCGCATGGTC
AATGAAATCG AGGGTTATCG AGTACTGGAA GACAGCGCTT CCAATGGCGA AGAAGCCTTG
GCGCTGATCG AAAAGCACAA GCCTGACGTG GTGCTACTTG ATATCCGTAT GCCGGGTATC
GACGGCCTGC AGGTGGCTGC CAAACTGTGC GAACGGGAAG CTCCGCCCGC CGTGGTCTTT
TGCACCGCCC ACGACGAATT TGCCTTGGAA GCCTTTCAGG TCAGCGCGGT CGGCTATCTG
GTCAAGCCTG TGCGCGCCGA GCATCTTATC GAAGCGTTGA AAAAGGCCGA GCGACCAAAC
CGCGTGCAAT TGGCGGCGAT GACACGGCCG GCGGCAGAAA GCGGTTCCGG GCCGCGCACG
CACATCAGTG CGCGTACCCG AAAAGGTATC GAATTGATTC CGCTGGATCA GGTGATCTAC
TTCATCGCCG ATCACAAGTA CGTCACCCTG CGCCACGAAG GTGGTGAAGT CCTGCTGGAC
GAGCCGCTCA AGGCACTGGA AGACGAGTTC GGCGACCGGT TCGTGCGTAT TCACCGCAAT
GCGCTGGTAG CCCGAAAGCG AATCGAAAGC ATGAAGCGCA CGCCGGTGGG GCATTTCGAG
CTGTTCCTCA GAGGCCTGAA TGGCGATGCG CTGATCGTCA GTCGCCGCCA TGTAGCGGGT
GTGCGCAAAA TGATGCAGCA GCTCTAG
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| Protein sequence | MNVLIVDDEP LARERLSRMV NEIEGYRVLE DSASNGEEAL ALIEKHKPDV VLLDIRMPGI
DGLQVAAKLC EREAPPAVVF CTAHDEFALE AFQVSAVGYL VKPVRAEHLI EALKKAERPN
RVQLAAMTRP AAESGSGPRT HISARTRKGI ELIPLDQVIY FIADHKYVTL RHEGGEVLLD
EPLKALEDEF GDRFVRIHRN ALVARKRIES MKRTPVGHFE LFLRGLNGDA LIVSRRHVAG
VRKMMQQL
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