| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0103 |
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| Symbol | dadX |
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| ID | 1181711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 122682 |
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| End bp | 123755 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391480 |
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| Product | alanine racemase, catabolic |
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| Protein accession | NP_789962 |
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| Protein GI | 28867343 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAG CCCGCGCCCT TATTGATCTT CAGGCACTGC GCCACAACTA CCGACTGGCC
CGTGACAGCA GCGGCGGCAG AGCGCTGGCC GTCATCAAGG CCGACGCCTA TGGTCACGGC
GCGGTGCATG TCGCTCAGGC ACTGGAAGCG CAGGCCGACG GTTTCGCGGT GGCGTGTATC
GAAGAAGCAC TGGAACTGCG CGCGGCAGGT ATCCGAGCGC CGATTCTGCT GCTCGAAGGC
TTTTTTGAAG CCGACGAGCT GGCACTGATT GTCGAGCACG ACTTGTGGAC GGTGGTGCAC
GCGATCTGGC AACTGGAAGC CATTGAACAG GCGCAGCTTG GCAAACCTCT GACGGTCTGG
CTCAAGCTCG ACACCGGCAT GCACCGTGTG GGCCTGCACC CTTCCGAGTA TCGCGCGGCG
TATCAACGTT TACTGGCGAC CGGCAAAGTG GCCAGGGTCG TCCTGATGAG CCATTTTTCG
TGTGCCGACG AATTGAACAG CGCCTGCAGC GATCAGCAGG TCGCGGTATT TGAAGCCGCT
CGCCAAGGGC TTGTGGCTGA AACCAGCCTG AAAAATTCTC CCGCCGTGAT GGGCTGGCCG
AAGATCCCCA GCGATTGGTC ACGCACCGGC ATCATGCTCT ACGGCGCCAC GCCGTTTGAC
CAGACGCAGC CGCTTGCCGA GCGTCTGCAA CCGGTCATGA CCCTTGAATC GAAAGTCATC
AGCGTGCGCG AACTGCCCGC TGGCGAAGCC GTGGGTTACG GCGCGACTTT CGTCAGTGAG
CGCCCCCTGC GCATCGGCGT AGTCGCAATG GGCTACGCCG ACGGCTATCC GCGCCATGCG
CCGACGGGTA CGCCGGTGCT GATCGACGGC CAACGCTCAA GGCTGCTTGG CCGGGTGTCG
ATGGACATGC TCTGCGTAGA CCTGACCGAC GTGCCGCAGG CCGGGCTCGG CAGCCGCGTC
GAGCTGTGGG GCAAGGCCGT GCTCGCCAGC GAAGTGGCCA CGCAAGCGGG CACCATTCCC
TATCAGATCT TCTGCAACCT GCGTCGCGTT CCGCGCATCT ATTCAGAAAA CTGA
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| Protein sequence | MRPARALIDL QALRHNYRLA RDSSGGRALA VIKADAYGHG AVHVAQALEA QADGFAVACI
EEALELRAAG IRAPILLLEG FFEADELALI VEHDLWTVVH AIWQLEAIEQ AQLGKPLTVW
LKLDTGMHRV GLHPSEYRAA YQRLLATGKV ARVVLMSHFS CADELNSACS DQQVAVFEAA
RQGLVAETSL KNSPAVMGWP KIPSDWSRTG IMLYGATPFD QTQPLAERLQ PVMTLESKVI
SVRELPAGEA VGYGATFVSE RPLRIGVVAM GYADGYPRHA PTGTPVLIDG QRSRLLGRVS
MDMLCVDLTD VPQAGLGSRV ELWGKAVLAS EVATQAGTIP YQIFCNLRRV PRIYSEN
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