| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0100 |
|---|
| Symbol | lrp |
|---|
| ID | 1181708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 120331 |
|---|
| End bp | 120819 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637391477 |
|---|
| Product | leucine-responsive regulatory protein |
|---|
| Protein accession | NP_789959 |
|---|
| Protein GI | 28867340 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCACTC AACACCAGTC AAATCGCGAG CTGGACAAGA TCGACCGCAA CATCTTGCGC
ATCCTTCAGG CCGACGGTCG TATCTCGTTT ACCGAGCTTG GCGAGCGGGT TGGCCTCTCG
ACCACGCCGT GCACCGAGCG CGTGCGTCGG CTGGAGCGCG AGGGGATCAT CATGGGGTAC
AACGCCCGTC TGAACCCACA GAGCCTCAAG GCTAGCCTGC TGGTGTTCGT GGAAATCAGT
CTGGATTACA AGTCCGGTGA CACGTTCGAG GAATTTCGCC GCGCAGTGCT CAAGCTGCCG
CACGTGCTGG AGTGTCATCT GGTGTCCGGC GACTTCGACT ACCTGGTCAA GGCGCGTATT
TCCGAAATGG CCTCTTATCG CAAGCTGCTG GGCGACATCT TGCTCAAGCT GCCGCATGTG
CGCGAGTCCA AGAGCTACAT CGTGATGGAA GAAGTCAAAG AGAGCCTGAA CCTGCCGATT
GCCGACTGA
|
|---|
| Protein sequence | MRTQHQSNRE LDKIDRNILR ILQADGRISF TELGERVGLS TTPCTERVRR LEREGIIMGY
NARLNPQSLK ASLLVFVEIS LDYKSGDTFE EFRRAVLKLP HVLECHLVSG DFDYLVKARI
SEMASYRKLL GDILLKLPHV RESKSYIVME EVKESLNLPI AD
|
|---|
| |