Gene PSPTO_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0083 
SymbolalgC 
ID1181691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp103735 
End bp105132 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content59% 
IMG OID637391460 
Productphosphomannomutase AlgC 
Protein accessionNP_789942 
Protein GI28867323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC CAGCATCCGT GGCACCCATT CTCCCCGACA CTATTTTCCG TGCGTATGAC 
ATCCGCGGCG TGGTCGAAGA TACCCTCAAC GCTGAAACGG CGTACTGGAT CGGTCGCGCA
ATCGGCTCCG AAAGCCTGGC GCAGAACGAA CCCAATGTCA GCGTTGGCCG CGATGGTCGT
CTTTCCGGTC CTGAGCTGGT GCAGCAACTG ATCCAGGGCC TGCACGACAG CGGTTGCCAT
GTCAGCGACG TCGGTCTGGT GCCGACGCCT GCGCTGTATT ACGCAGCCAA CGTGCTGGCC
GGCAAGACCG GCGTCATGTT GACCGGTAGC CACAACCCCA AGGACTACAA CGGCTTCAAG
ATCGTCATCG CGGGCGATAC CCTCGCCAAC GAGCAGATCC AGGCGCTGCA CGAGCGCATC
AAGACCAACA ACCTGACCTC GCAAAAAGGC AGCATCACCC AAGTCAACAT CCTCGATCGC
TACTTCAAGC AGATCAAGGA CGACATTGTC ATGGCGCGCA AGCTCAAGGT CGTGGTCGAT
TGCGGCAATG GTGCGGCAGG TGTGATCGCC CCGCAGTTGA TCGAAGCGCT GGGCTGCGAA
GTGATTTCCC TGTTCGCCGA GGTGGACGGC AACTTCCCGA ACCATCACCC GGACCCGGGC
AAGCTGGAAA ACCTGCAAGA CCTGATCGCC AAGGTCAAGG AAACCGGTGC CGATCTGGGT
CTGGCCTTCG ACGGTGACGG CGACCGTGTC GGTGTTGTGA CCAACGCAGG CAATGTGGTT
TATCCCGACC GCCTGTTGAT GCTGTTCGCG CTGGATGTAC TCAAGCGCAA TCCGGGTGCC
GACATCATTT TCGACGTCAA ATGCACACGT CGCCTGACGC CGCTGATCAG CGAACACGGT
GGTCGTCCGG TCATGTGGAA AACCGGTCAC TCGCTGATCA AGAAAGAAAT GAAAAAAAGC
GGCGCGTTGC TGGCTGGCGA AATGAGCGGC CATATCTTCT TCAAGGAGCG CTGGTTCGGT
TTCGATGACG GCATCTACAG CGCGGCACGT CTGCTGGAGA TCCTCAGCCA GGAACCGGCC
AATGCCGAAG ACCTGTTCGA GACCTTCCCG AACGACATTT CGACGCCTGA AATCAACATC
AAGGTGACGG ACGTCACCAA GTTCAGCATC ATTGAGGCCC TTGAGAAAGA CGCCCAATGG
GGCGACGCCA AACTGACCAC TATCGACGGT GTCCGTGTGG ACTATCCGAA GGGCTGGGGT
CTGGTTCGCG CTTCCAACAC CACGCCGGTG CTGGTGCTGC GTTTTGAGGC TGAAACCCAG
GCCGAACTGG AGCGTATCCA GGGTGTGTTC CACGCTGAGC TCAAGAAAGT TGCGCCGGAC
CTCGACCTGC CATTTTGA
 
Protein sequence
MNSPASVAPI LPDTIFRAYD IRGVVEDTLN AETAYWIGRA IGSESLAQNE PNVSVGRDGR 
LSGPELVQQL IQGLHDSGCH VSDVGLVPTP ALYYAANVLA GKTGVMLTGS HNPKDYNGFK
IVIAGDTLAN EQIQALHERI KTNNLTSQKG SITQVNILDR YFKQIKDDIV MARKLKVVVD
CGNGAAGVIA PQLIEALGCE VISLFAEVDG NFPNHHPDPG KLENLQDLIA KVKETGADLG
LAFDGDGDRV GVVTNAGNVV YPDRLLMLFA LDVLKRNPGA DIIFDVKCTR RLTPLISEHG
GRPVMWKTGH SLIKKEMKKS GALLAGEMSG HIFFKERWFG FDDGIYSAAR LLEILSQEPA
NAEDLFETFP NDISTPEINI KVTDVTKFSI IEALEKDAQW GDAKLTTIDG VRVDYPKGWG
LVRASNTTPV LVLRFEAETQ AELERIQGVF HAELKKVAPD LDLPF