Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0083 |
Symbol | algC |
ID | 1181691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 103735 |
End bp | 105132 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391460 |
Product | phosphomannomutase AlgC |
Protein accession | NP_789942 |
Protein GI | 28867323 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGCC CAGCATCCGT GGCACCCATT CTCCCCGACA CTATTTTCCG TGCGTATGAC ATCCGCGGCG TGGTCGAAGA TACCCTCAAC GCTGAAACGG CGTACTGGAT CGGTCGCGCA ATCGGCTCCG AAAGCCTGGC GCAGAACGAA CCCAATGTCA GCGTTGGCCG CGATGGTCGT CTTTCCGGTC CTGAGCTGGT GCAGCAACTG ATCCAGGGCC TGCACGACAG CGGTTGCCAT GTCAGCGACG TCGGTCTGGT GCCGACGCCT GCGCTGTATT ACGCAGCCAA CGTGCTGGCC GGCAAGACCG GCGTCATGTT GACCGGTAGC CACAACCCCA AGGACTACAA CGGCTTCAAG ATCGTCATCG CGGGCGATAC CCTCGCCAAC GAGCAGATCC AGGCGCTGCA CGAGCGCATC AAGACCAACA ACCTGACCTC GCAAAAAGGC AGCATCACCC AAGTCAACAT CCTCGATCGC TACTTCAAGC AGATCAAGGA CGACATTGTC ATGGCGCGCA AGCTCAAGGT CGTGGTCGAT TGCGGCAATG GTGCGGCAGG TGTGATCGCC CCGCAGTTGA TCGAAGCGCT GGGCTGCGAA GTGATTTCCC TGTTCGCCGA GGTGGACGGC AACTTCCCGA ACCATCACCC GGACCCGGGC AAGCTGGAAA ACCTGCAAGA CCTGATCGCC AAGGTCAAGG AAACCGGTGC CGATCTGGGT CTGGCCTTCG ACGGTGACGG CGACCGTGTC GGTGTTGTGA CCAACGCAGG CAATGTGGTT TATCCCGACC GCCTGTTGAT GCTGTTCGCG CTGGATGTAC TCAAGCGCAA TCCGGGTGCC GACATCATTT TCGACGTCAA ATGCACACGT CGCCTGACGC CGCTGATCAG CGAACACGGT GGTCGTCCGG TCATGTGGAA AACCGGTCAC TCGCTGATCA AGAAAGAAAT GAAAAAAAGC GGCGCGTTGC TGGCTGGCGA AATGAGCGGC CATATCTTCT TCAAGGAGCG CTGGTTCGGT TTCGATGACG GCATCTACAG CGCGGCACGT CTGCTGGAGA TCCTCAGCCA GGAACCGGCC AATGCCGAAG ACCTGTTCGA GACCTTCCCG AACGACATTT CGACGCCTGA AATCAACATC AAGGTGACGG ACGTCACCAA GTTCAGCATC ATTGAGGCCC TTGAGAAAGA CGCCCAATGG GGCGACGCCA AACTGACCAC TATCGACGGT GTCCGTGTGG ACTATCCGAA GGGCTGGGGT CTGGTTCGCG CTTCCAACAC CACGCCGGTG CTGGTGCTGC GTTTTGAGGC TGAAACCCAG GCCGAACTGG AGCGTATCCA GGGTGTGTTC CACGCTGAGC TCAAGAAAGT TGCGCCGGAC CTCGACCTGC CATTTTGA
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Protein sequence | MNSPASVAPI LPDTIFRAYD IRGVVEDTLN AETAYWIGRA IGSESLAQNE PNVSVGRDGR LSGPELVQQL IQGLHDSGCH VSDVGLVPTP ALYYAANVLA GKTGVMLTGS HNPKDYNGFK IVIAGDTLAN EQIQALHERI KTNNLTSQKG SITQVNILDR YFKQIKDDIV MARKLKVVVD CGNGAAGVIA PQLIEALGCE VISLFAEVDG NFPNHHPDPG KLENLQDLIA KVKETGADLG LAFDGDGDRV GVVTNAGNVV YPDRLLMLFA LDVLKRNPGA DIIFDVKCTR RLTPLISEHG GRPVMWKTGH SLIKKEMKKS GALLAGEMSG HIFFKERWFG FDDGIYSAAR LLEILSQEPA NAEDLFETFP NDISTPEINI KVTDVTKFSI IEALEKDAQW GDAKLTTIDG VRVDYPKGWG LVRASNTTPV LVLRFEAETQ AELERIQGVF HAELKKVAPD LDLPF
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