Gene PSPTO_0080 details

Gene Information

• Locus tag: PSPTO_0080
• Symbol: pyrE
• ID: 1181688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 101265
• End bp: 101906
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637391457
• Product: orotate phosphoribosyltransferase
• Protein accession: NP_789939
• Protein GI: 28867320
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGCGT ATCAACGCGA TTTCATTCGT TTTGCCATTG ATCGAGGCGT TTTGCGCTTT 
GGTGAGTTCA CCCTCAAGTC CGGGCGCACC AGCCCGTACT TCTTCAATGC CGGGCTGTTC 
AATACCGGTT CCGCACTGGC TCAGCTGGGG CGTTTCTACG CAGCGGCGGT CGTCGAGAGC 
GGTATCCGCT TCGACGTTCT GTTCGGCCCG GCCTACAAGG GCATTCCGCT GGCGTCGGCG 
ACAGCCGTGG CGCTGGCCGA ACACCATGAC CGGGATCTGC CGTGGTGCTT CAACCGCAAG 
GAAGCCAAAG CGCACGGCGA AGGTGGCAGC CTGGTCGGTT CTCCGCTGGC GGGCAACGTG 
CTGATCATAG ACGACGTGAT CACTGCGGGC ACGGCCATCC GTGAGGTCAT GCAGATCATC 
AAAGACCAGG ACGCCACAGC GGCTGGCGTG CTGATCGCCC TCAATCGCCA GGAACGCGGC 
AATGGCGAGC TGTCGGCGAT TCAGGAAGTC GAGCGTGACT TCGGCATTCC GGTGGTGAGC 
ATCGTTTCAC TGAATCAGGT GCTTGAGTTC CTGGCCGATG ACGAACAGCT CAAGCAGCAC 
CTGCCTGCCG TCGAAGCCTA CCGCGCGCAA TACGGAATCT GA 

 

Protein sequence

MQAYQRDFIR FAIDRGVLRF GEFTLKSGRT SPYFFNAGLF NTGSALAQLG RFYAAAVVES 
GIRFDVLFGP AYKGIPLASA TAVALAEHHD RDLPWCFNRK EAKAHGEGGS LVGSPLAGNV 
LIIDDVITAG TAIREVMQII KDQDATAAGV LIALNRQERG NGELSAIQEV ERDFGIPVVS 
IVSLNQVLEF LADDEQLKQH LPAVEAYRAQ YGI