| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0077 |
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| Symbol | rph |
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| ID | 1181685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 99223 |
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| End bp | 99945 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391454 |
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| Product | ribonuclease PH |
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| Protein accession | NP_789936 |
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| Protein GI | 28867317 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACGTC CAAGTGGTCG CGCCGCCGAT CAGCTCCGCT CGATCCGCAT CACCCGCAAC
TACACCAAAC ACGCCGAGGG TTCTGTACTG GTCGAGTTTG GTGATACCAA GGTGATTTGC
ACCGTCAGCG TCGAAAACGG CGTGCCACGC TTCCTCAAGG GCCAGGGCCA GGGTTGGCTG
ACTGCCGAAT ACGGCATGTT GCCGCGCGCC ACCGGCGAGC GTAACCAGCG TGAGGCCAGC
CGTGGCAAAC AGGGCGGTCG TACACTCGAG ATCCAGCGCC TGATCGGTCG TTCGCTGCGC
GCAGCACTGG ACATGTCCAA GCTGGGCGAC GTCACCCTGT ATGTCGATTG CGATGTCATT
CAGGCTGACG GCGGCACTCG TACCGCGTCC ATCACCGGCG CAATGGTTGC CCTGGCAGAT
GCCTTGAAAG TCATCAAGAA GCGCGGCGGC CTGAAAGGCG GCGACCCGCT CAAGCAGATG
ATCGCAGCCG TTTCGGTCGG CATGTATCAG GGCGAGCCGG TGCTTGACCT CGATTACCTG
GAAGATTCCG CCGCTGAAAC CGACCTGAAC GTGGTCATGA CCAGCGCAGG CGGCTTCATT
GAAGTACAGG GCACCGCAGA AGGCGCACCG TTTCAGCCTG AAGAGCTGAA CGCGATGCTC
GCTCTGGCAC AGAAGGGCAT GACCGAATTG TTTGAAATGC AGCGCGCCGC ACTGGCCGAC
TGA
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| Protein sequence | MKRPSGRAAD QLRSIRITRN YTKHAEGSVL VEFGDTKVIC TVSVENGVPR FLKGQGQGWL
TAEYGMLPRA TGERNQREAS RGKQGGRTLE IQRLIGRSLR AALDMSKLGD VTLYVDCDVI
QADGGTRTAS ITGAMVALAD ALKVIKKRGG LKGGDPLKQM IAAVSVGMYQ GEPVLDLDYL
EDSAAETDLN VVMTSAGGFI EVQGTAEGAP FQPEELNAML ALAQKGMTEL FEMQRAALAD
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