| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0072 |
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| Symbol | |
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| ID | 1181680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 94399 |
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| End bp | 94779 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637391449 |
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| Product | endoribonuclease L-PSP, putative |
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| Protein accession | NP_789931 |
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| Protein GI | 28867312 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAGA CTGTCATCAC CAGCGACAAA GCCCCTGCGG CTATCGGCCC GTATTCCCAG
GCGATCAAAG CTGGCAACAC CGTCTACATG TCCGGACAGA TTCCGCTGGA CCCGAGCACC
ATGGAGCTGG TTGAAGGCAT CGAAGCCCAG ATCACTCAGG TTTTCGAAAA CCTGAAGTCG
GTTGCGCAAG CCGCGGGCGG TTCGTTCAAG GACATCGTCA AACTGAACAT CTTTCTGACC
GACCTGGGTC ACTTCGCCAA GGTCAACGAG ATCATGGGCA GCTATTTCTC GCAGCCGTAC
CCGGCGCGTG CGGCCATTGG CGTTGCGGCA TTGCCGCGTG GCGCTCAGGT TGAAATGGAC
GCGATTCTCG TCATCGAATA A
|
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| Protein sequence | MTKTVITSDK APAAIGPYSQ AIKAGNTVYM SGQIPLDPST MELVEGIEAQ ITQVFENLKS
VAQAAGGSFK DIVKLNIFLT DLGHFAKVNE IMGSYFSQPY PARAAIGVAA LPRGAQVEMD
AILVIE
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