Gene PSPTO_0023 details

Gene Information

• Locus tag: PSPTO_0023
• ID: 1181631
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 29320
• End bp: 29919
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637391402
• Product: hypothetical protein
• Protein accession: NP_789884
• Protein GI: 28867265

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGCGCGG CGTCCACGCT CGTATTGCTG GATACCAACG CGTATCTGCG GCTTGCGAAG 
CGTGTACGCC CAATGCTGGG GGTTGGGTTT GGGCAGAAAA ACTACGTTCT GACCATTCTG 
AAAGATGTTG AAGAGGAAGT GCATCGCAGT GGTGCTCTGA AATTCAAGTT CCCTTGGTTT 
GACGGTGAGG ATCTTGCCGC TGAGCGGGTT GCCAAGCAGG TACGACTCAG CGCCGACGAG 
AAAGGTCAGT TAGAAGCTGC GCAAAGCGTC CTGCGTGGTT GGGTCTTAAC GAACCCGACG 
GTTTATACCA CGGCTGGTCG TTCTCCCCCT TCCTCCACGG ACTGTCGGGT GCTTGCGTTT 
GGCCAAATTC GAGACGCCAT TGTGGTCACG GATGACCTAG GTATGCACAA GCTGGCTCAA 
GATTTCGGAA TTGCTGTCTG GCATGGCCAC GAACTGCTAA AGAAAATGCT CACGGCCAAG 
TTGATCACAA ATGAGCAGGT CAAAAGTATC TTCGAAGCGC TGGAGCTCAA CGGCGACTTG 
ACTGAAACGT GGCGCCAGGC AAAACACATA GCCTTTCTGA AGCTATTCGG TAGGGGCTAA 

 

Protein sequence

MSAASTLVLL DTNAYLRLAK RVRPMLGVGF GQKNYVLTIL KDVEEEVHRS GALKFKFPWF 
DGEDLAAERV AKQVRLSADE KGQLEAAQSV LRGWVLTNPT VYTTAGRSPP SSTDCRVLAF 
GQIRDAIVVT DDLGMHKLAQ DFGIAVWHGH ELLKKMLTAK LITNEQVKSI FEALELNGDL 
TETWRQAKHI AFLKLFGRG