Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0016 |
Symbol | |
ID | 1181624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 19968 |
End bp | 20435 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637391395 |
Product | hypothetical protein |
Protein accession | NP_789877 |
Protein GI | 28867258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAC GAGCAATGAA CAATAGCCGA ACGGTAAGTA CAACAAAGGA ACTTAAGAAG GCCATTGATG ACAAGATCGG CGACATCATT ATCACTGATG CCAAGTTAGC AACCTGCGTC AAAGTGGCTT CAAATATCCC CTACAAAACA CTCGCTGCCA TTATCGCTGT GGCTGGAGCA TCTGCTGCCG TATTTTGGAA CCCTGTCGGC TGGTTCGGCG CGGCAGCCGG CAGCGCAGCA GGGGTCGGTG TGGTTGCAAG CGCCGCAGCT GCGGCAGGTA TTACTACGGG TACCGCCGCA ATCATTGGCG GCGTACTGGT GCTTTTAGCG GCGCTCAGTG TTTCGGCTCT GGCCATGGTG AAAGACTATG ATTTCGACGC CGGTATCTCA GCTAGCTCGT CAGGTCTTGA AGGCGGAATC CCCAAAGGAA AAACATCCGC GCACTTGAAG ATCAAGCGCA ATGTCTGA
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Protein sequence | MKERAMNNSR TVSTTKELKK AIDDKIGDII ITDAKLATCV KVASNIPYKT LAAIIAVAGA SAAVFWNPVG WFGAAAGSAA GVGVVASAAA AAGITTGTAA IIGGVLVLLA ALSVSALAMV KDYDFDAGIS ASSSGLEGGI PKGKTSAHLK IKRNV
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