Gene PSPTO_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0016 
Symbol 
ID1181624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp19968 
End bp20435 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content53% 
IMG OID637391395 
Producthypothetical protein 
Protein accessionNP_789877 
Protein GI28867258 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGAAC GAGCAATGAA CAATAGCCGA ACGGTAAGTA CAACAAAGGA ACTTAAGAAG 
GCCATTGATG ACAAGATCGG CGACATCATT ATCACTGATG CCAAGTTAGC AACCTGCGTC
AAAGTGGCTT CAAATATCCC CTACAAAACA CTCGCTGCCA TTATCGCTGT GGCTGGAGCA
TCTGCTGCCG TATTTTGGAA CCCTGTCGGC TGGTTCGGCG CGGCAGCCGG CAGCGCAGCA
GGGGTCGGTG TGGTTGCAAG CGCCGCAGCT GCGGCAGGTA TTACTACGGG TACCGCCGCA
ATCATTGGCG GCGTACTGGT GCTTTTAGCG GCGCTCAGTG TTTCGGCTCT GGCCATGGTG
AAAGACTATG ATTTCGACGC CGGTATCTCA GCTAGCTCGT CAGGTCTTGA AGGCGGAATC
CCCAAAGGAA AAACATCCGC GCACTTGAAG ATCAAGCGCA ATGTCTGA
 
Protein sequence
MKERAMNNSR TVSTTKELKK AIDDKIGDII ITDAKLATCV KVASNIPYKT LAAIIAVAGA 
SAAVFWNPVG WFGAAAGSAA GVGVVASAAA AAGITTGTAA IIGGVLVLLA ALSVSALAMV
KDYDFDAGIS ASSSGLEGGI PKGKTSAHLK IKRNV