Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0013 |
Symbol | |
ID | 1181621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 17992 |
End bp | 18561 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637391392 |
Product | hypothetical protein |
Protein accession | NP_789874 |
Protein GI | 28867255 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATCGCG AATATCACTT GGTTAGGGAA TTACTGGAGC CAGGACGGCG GCAACGGGAT GAGGCGCGTG CACGCATTCG CTCCATGCTG GCCATGGAAT CTATTGCGGT CGAAGAGGTG GAGGTCTCCG AACGAGATAT TGACCGCATT GAAAAGGCCG TCCGTGCAGG CCAAGGGATC AAAGAGGTCT TTCCACGTTT ATCCACAGTA GGCACACGGA CGGATGGTGA AGGGGTGAAT CTGCTCGTGC ACTTCACCAA GAAGGAAGGC GCCCCCATCC GATATATCGG CGGTGACGAT CCTGCTGAAG CGGCGGCGGT GCGGGAGCTG GATCTTCAGA AGAAGTTCTA CCTGGGAGCC GCCGACCTCG CGCAAAAGGT CGGACTGACG CTGCCCAAAG CCAGCGCGCT ACGAGCGCAT CTGGGAGTCG ATGAGGATGT GGCCTGCCGT GATGTCTTCG AGTTTGGATC GACCCGGATT CCCCGTTTTT CTGATAACGC GTTCAGACGG ATGCGCGAAG CGTTGGCTAC TGTCGACATC GAAGACGTTT GGCGGGCACG ACAGAGATAA
|
Protein sequence | MDREYHLVRE LLEPGRRQRD EARARIRSML AMESIAVEEV EVSERDIDRI EKAVRAGQGI KEVFPRLSTV GTRTDGEGVN LLVHFTKKEG APIRYIGGDD PAEAAAVREL DLQKKFYLGA ADLAQKVGLT LPKASALRAH LGVDEDVACR DVFEFGSTRI PRFSDNAFRR MREALATVDI EDVWRARQR
|
| |