Gene PSPTO_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0013 
Symbol 
ID1181621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp17992 
End bp18561 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID637391392 
Producthypothetical protein 
Protein accessionNP_789874 
Protein GI28867255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATCGCG AATATCACTT GGTTAGGGAA TTACTGGAGC CAGGACGGCG GCAACGGGAT 
GAGGCGCGTG CACGCATTCG CTCCATGCTG GCCATGGAAT CTATTGCGGT CGAAGAGGTG
GAGGTCTCCG AACGAGATAT TGACCGCATT GAAAAGGCCG TCCGTGCAGG CCAAGGGATC
AAAGAGGTCT TTCCACGTTT ATCCACAGTA GGCACACGGA CGGATGGTGA AGGGGTGAAT
CTGCTCGTGC ACTTCACCAA GAAGGAAGGC GCCCCCATCC GATATATCGG CGGTGACGAT
CCTGCTGAAG CGGCGGCGGT GCGGGAGCTG GATCTTCAGA AGAAGTTCTA CCTGGGAGCC
GCCGACCTCG CGCAAAAGGT CGGACTGACG CTGCCCAAAG CCAGCGCGCT ACGAGCGCAT
CTGGGAGTCG ATGAGGATGT GGCCTGCCGT GATGTCTTCG AGTTTGGATC GACCCGGATT
CCCCGTTTTT CTGATAACGC GTTCAGACGG ATGCGCGAAG CGTTGGCTAC TGTCGACATC
GAAGACGTTT GGCGGGCACG ACAGAGATAA
 
Protein sequence
MDREYHLVRE LLEPGRRQRD EARARIRSML AMESIAVEEV EVSERDIDRI EKAVRAGQGI 
KEVFPRLSTV GTRTDGEGVN LLVHFTKKEG APIRYIGGDD PAEAAAVREL DLQKKFYLGA
ADLAQKVGLT LPKASALRAH LGVDEDVACR DVFEFGSTRI PRFSDNAFRR MREALATVDI
EDVWRARQR