Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0012 |
Symbol | |
ID | 1181620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 17514 |
End bp | 18017 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637391391 |
Product | hypothetical protein |
Protein accession | NP_789873 |
Protein GI | 28867254 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTCT TGCGCGACGC CAGAACGCTG AAGACCAAAG CCGTCAGCTC CCTCCGTACA GGGATGCAGG CCTTTAACAG CTTTGATGAC GATGGGCGCA TTACCACCGT CTTGCTACAC CTTCAGCATG CGTGCGAAAT GCTGTTAAAG GCGGTGTTGG TTCAGAACAA AGCGAAGGTT TTTGATAAGG AGACTGGACG CTCTATAACC TTCGACAAAA GCCTCGGACT TTGTATGGCG CACTATGGCC TGACGGCAGA GGAAGCGGGA GTGATGCGAG CCGTCGACAG CCTACGCGAT GCCGCCCAGC ATTGGTTCAT TGTGGTCGCG GAGGATCTGC TGTACCTCAA TACGAGGGCA CTGATTACCG CCTTTGATGC CTACCTTCAG CGAGCCCTGG AAGATGCCTT GATCGAGCAT ATCCCGGCTC GGGTATTGCC CGTCTCAACC ATCCCCGCCA GGAGACTTCG AGTTTCTGGT GGATCGCGAA TATCACTTGG TTAG
|
Protein sequence | MKLLRDARTL KTKAVSSLRT GMQAFNSFDD DGRITTVLLH LQHACEMLLK AVLVQNKAKV FDKETGRSIT FDKSLGLCMA HYGLTAEEAG VMRAVDSLRD AAQHWFIVVA EDLLYLNTRA LITAFDAYLQ RALEDALIEH IPARVLPVST IPARRLRVSG GSRISLG
|
| |