Gene PSPTO_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0012 
Symbol 
ID1181620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp17514 
End bp18017 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID637391391 
Producthypothetical protein 
Protein accessionNP_789873 
Protein GI28867254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCT TGCGCGACGC CAGAACGCTG AAGACCAAAG CCGTCAGCTC CCTCCGTACA 
GGGATGCAGG CCTTTAACAG CTTTGATGAC GATGGGCGCA TTACCACCGT CTTGCTACAC
CTTCAGCATG CGTGCGAAAT GCTGTTAAAG GCGGTGTTGG TTCAGAACAA AGCGAAGGTT
TTTGATAAGG AGACTGGACG CTCTATAACC TTCGACAAAA GCCTCGGACT TTGTATGGCG
CACTATGGCC TGACGGCAGA GGAAGCGGGA GTGATGCGAG CCGTCGACAG CCTACGCGAT
GCCGCCCAGC ATTGGTTCAT TGTGGTCGCG GAGGATCTGC TGTACCTCAA TACGAGGGCA
CTGATTACCG CCTTTGATGC CTACCTTCAG CGAGCCCTGG AAGATGCCTT GATCGAGCAT
ATCCCGGCTC GGGTATTGCC CGTCTCAACC ATCCCCGCCA GGAGACTTCG AGTTTCTGGT
GGATCGCGAA TATCACTTGG TTAG
 
Protein sequence
MKLLRDARTL KTKAVSSLRT GMQAFNSFDD DGRITTVLLH LQHACEMLLK AVLVQNKAKV 
FDKETGRSIT FDKSLGLCMA HYGLTAEEAG VMRAVDSLRD AAQHWFIVVA EDLLYLNTRA
LITAFDAYLQ RALEDALIEH IPARVLPVST IPARRLRVSG GSRISLG