| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0003 |
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| Symbol | recF |
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| ID | 1181611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3039 |
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| End bp | 4142 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637391383 |
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| Product | DNA replication and repair protein RecF |
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| Protein accession | NP_789865 |
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| Protein GI | 28867246 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTA GTCGCGTCTC GGTCACCGGG GTGCGCAATC TGCACCCGGT GACCCTCTCC
CCCTCCCCGC GTATCAATAT CCTTTACGGT GCCAACGGCA GCGGCAAAAC CAGTGTGCTG
GAAGCGATCC ATCTGCTGGG CATCGCCCGC TCGTTTCGCA GCAGTCGTCT GCTTCCCGTT
ATTCAGTACG AGCAGCCGTC ATGTACGGTT TTCGGGCAGG TTGATCTCGC GCAAGGCGGC
CACAGCAATC TGGGTGTTTC ACGCGATAGG CAGGGTGAAT TTCAGATTCG CATCGACGGC
CAGAATGCAC GCAGCGCTGC GCAGCTTGCC GAGATCCTGC CGCTGCAGTT AATCAATCCT
GATAGCTTCC GATTACTTGA GGGCGCGCCG AAGATTCGCA GGCAGTTTCT GGACTGGGGA
GTGTTCCACG TGGAACCTCG CTTCATGTCC ACCTGGCAGC GCCTGCAGAA GGCCCTCAAG
CAGCGAAACT CGTGGCTTCG GCATGGTACA CTTGACGCCG CTTCGCAGGC GGCATGGGAC
CGGGAGCTGT GTTTGGCAAG TGACGAGATC GATGAGTTTC GTCGAGCCTA TATCAAGGCA
TTGAAGCCCG TCTTTGAAAA GACTTTGAGC GAACTTGTTG AACTTGAAGG TTTGACCCTT
AGCTACTACC GAGGATGGGA CAAGGAAAAA GAGCTGAGCA CTGTGCTCGC CTCCTCCCTG
AATCGCGATC AGCAAATGGG CCACACCCAG GCAGGACCAC AACGTGCTGA TCTGCGCCTT
AGATTAGGTG CCCACAACGC GGCAGATATC TTGTCACGTG GTCAGCAAAA ATTGGTGGTC
TGTGCACTGC GTATTGCTCA AGGACACCTG GTCAGCCAGG TCCGTCGCGG CCAGTGTATT
TACCTGGTGG ATGACTTGCC CTCCGAACTG GACGACAACC ATCGACGCGC GCTTTGCCGC
TTGCTGGAAG AATTACGCTG CCAGGTATTT ATCACCTGTG TAGATCAAGA ATTTTTGAGG
GAAGGCTGGC AGACGGATAC GCCAGTCGCA TTGTTCCACG TGGAACAAGG CCGTATCACC
CAGACCCACG ACCATCGGGA GTGA
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| Protein sequence | MSLSRVSVTG VRNLHPVTLS PSPRINILYG ANGSGKTSVL EAIHLLGIAR SFRSSRLLPV
IQYEQPSCTV FGQVDLAQGG HSNLGVSRDR QGEFQIRIDG QNARSAAQLA EILPLQLINP
DSFRLLEGAP KIRRQFLDWG VFHVEPRFMS TWQRLQKALK QRNSWLRHGT LDAASQAAWD
RELCLASDEI DEFRRAYIKA LKPVFEKTLS ELVELEGLTL SYYRGWDKEK ELSTVLASSL
NRDQQMGHTQ AGPQRADLRL RLGAHNAADI LSRGQQKLVV CALRIAQGHL VSQVRRGQCI
YLVDDLPSEL DDNHRRALCR LLEELRCQVF ITCVDQEFLR EGWQTDTPVA LFHVEQGRIT
QTHDHRE
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