Gene SO_A0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_A0172 
Symbol 
ID1172595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004349 
Strand- 
Start bp160178 
End bp160804 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content46% 
IMG OID637346609 
Productresolvase family site-specific recombinase 
Protein accessionNP_720486 
Protein GI24376378 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATT ATGCGTATTT ACGTGTATCA ACAGATGCAC AAGATGTTGA TAATCAAAAA 
CACGGTATTT TAGAGTTTGC TAATCAACAT GGTTTGAGTA ATCTCTCATT CGTTGAAGAT 
ACAGTAAGCG GTAAGCACAA ATGGCGTGCG AGAAAACTCG GTGATTTGTT AGAGTCTCTG 
GCCCCAAAGG ATGTGATTGT ATTTGCCGAA GTTTCGCGCA TGGCCCGCAG CACATTACAA 
GTGCTCGAAA TCCTCGAATT TTGCACCGAA CGCCAAATTC ATGTGTATAT CGCCAAACAA 
AAAATGATCC TCGATGACTC GATGCAGAGT CGGATCACCG CGACCGTGTT AGGTTTGGCG 
GCAGAGATTG AGCGCGAGTT TATTTCCCTG CGTACCAAAG AAGCATTAGC CGCCCGTAAG 
GCTGCAGGTA TGAAACTTGG TCGCCCAGCC GGCCAGGCAG AAAAGACCAA GTTAGATAAA 
CATCGTAAAG CGATTGAAAG CTATTTAGAT AAGGGCTTGA GTATCCGTTC TATTGCCAAG 
TTGATCGATG AACCATCAAC GACAGTTAAC GACTATATCA AGCGCCACAG CTTGCGCGAA 
CGCGACCAGC TAGAAATGCG GATCTGA
 
Protein sequence
MANYAYLRVS TDAQDVDNQK HGILEFANQH GLSNLSFVED TVSGKHKWRA RKLGDLLESL 
APKDVIVFAE VSRMARSTLQ VLEILEFCTE RQIHVYIAKQ KMILDDSMQS RITATVLGLA 
AEIEREFISL RTKEALAARK AAGMKLGRPA GQAEKTKLDK HRKAIESYLD KGLSIRSIAK 
LIDEPSTTVN DYIKRHSLRE RDQLEMRI